New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 1783139 =220 (1.090)2 (0.010) 2/190 32.0 0.01 coding (859/906 nt) RCAP_rcc01645 lipoprotein
?NC_014034 2784674 = 183 (0.860)coding (254/429 nt) RCAP_rcc02594 response regulator receiver protein
Rejected: Position hash score below cutoff.

GCCCAGCTGGACTTTGGGGCTGGCGATTTCCTTTCAGCATCGCGACCTTGGCTATGCGGTCGATGATGCGATCGCGGCGGCGCTGGCCGATGGCCGGATCGCGC....................................................................................................  <  NC_014034/1783242‑1783139
...................................................................................................CGCGCGCGGTCAGCATCAGCACCGGCGTGCGGCCCAGATCGGCATCGGCGCGCAGCTCGGCCAGAATTTCCAGCCCCGAACAGCCCGGCAGCATCAGATCCAGAA  >  NC_014034/2784674‑2784773
                                                                                                                                                                                                            
                                                     ATGCGGTCGATGATGCGATCGCGGCGGCGCTGGCCGATGGCCGGATCGCGCGCGGTCAGCATCAGCACCGGCGTGCGGCCCAGATCGGCATCGGCGCGCAG                                                    >  2:2737441/1‑101 (MQ=255)
                                                                   GCGATCGCGGCGGCGCTGGCCGATGGCCGGATCGCGCGCGGTCAGCATCAGCACCGGCGTGCGGCCCAGATCGGCATCGGCGCGCAGCTCGGCCAGAATTT                                      <  1:2737647/101‑1 (MQ=255)
                                                                                                                                                                                                            
GCCCAGCTGGACTTTGGGGCTGGCGATTTCCTTTCAGCATCGCGACCTTGGCTATGCGGTCGATGATGCGATCGCGGCGGCGCTGGCCGATGGCCGGATCGCGC....................................................................................................  <  NC_014034/1783242‑1783139
...................................................................................................CGCGCGCGGTCAGCATCAGCACCGGCGTGCGGCCCAGATCGGCATCGGCGCGCAGCTCGGCCAGAATTTCCAGCCCCGAACAGCCCGGCAGCATCAGATCCAGAA  >  NC_014034/2784674‑2784773

Base quality scores:  ATCG  < 3 ≤  ATCG  < 14 ≤  ATCG  < 20 ≤  ATCG  < 26 ≤  ATCG  < 36 ≤  ATCG