New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 1824925 =188 (0.910)2 (0.010) 2/194 32.3 0.01 coding (113/408 nt) RCAP_rcc01690 hypothetical protein
?NC_014034 = 3452144 201 (0.950)coding (437/1662 nt) cydC cysteine ABC transporter ATP‑binding protein/permease CydC
Rejected: Position hash score below cutoff.

ATCACCGAGATGACGAAATCATGCACCGCCCCCGCGCCGGTCTTGTCCGAGGCATCGGCGACATCCTCGGGCCCAAGGCTGACATAGGTGCCCGCCAAGGGCC...................................................................................................  <  NC_014034/1825027‑1824925
....................................................................................................GCCACGGCGGCGGAAAGCGGCAGCACCAGGCGCAGCATCAACCCGTCGAGCGCGTCGATATCCGAGGTGATGCGGTTGAGCGCCTCGGCGCCGCGCAGCCGC  <  NC_014034/3452144‑3452046
                                                                                                                                                                                                          
                                      tGTCTTGTCCGAGGCATCGGCGACATCCTCGGGCCCAAGGCTGACATAGGTGCCCGCCAAGGGCCACGGCGGCGGAAAGCGGCAGCACCAGGCGCAGCATC                                                                 <  2:2588007/100‑1 (MQ=255)
                                       GTCTTGTCCGAGGCATCGGCGACATCCTCGGGCCCAAGGCTGACATAGGTGCCCGCCAAGGGCCACGGCGGCGGAAAGCGGCAGCACCAGGCGCAGCATCA                                                                >  1:2588198/1‑101 (MQ=255)
                                                                                                                                                                                                          
ATCACCGAGATGACGAAATCATGCACCGCCCCCGCGCCGGTCTTGTCCGAGGCATCGGCGACATCCTCGGGCCCAAGGCTGACATAGGTGCCCGCCAAGGGCC...................................................................................................  <  NC_014034/1825027‑1824925
....................................................................................................GCCACGGCGGCGGAAAGCGGCAGCACCAGGCGCAGCATCAACCCGTCGAGCGCGTCGATATCCGAGGTGATGCGGTTGAGCGCCTCGGCGCCGCGCAGCCGC  <  NC_014034/3452144‑3452046

Base quality scores:  ATCG  < 3 ≤  ATCG  < 8 ≤  ATCG  < 17 ≤  ATCG  < 24 ≤  ATCG  < 35 ≤  ATCG