New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 2066898	200 (1.050)	2 (0.010)	2/180	31.1	0.01	coding (242/303 nt)	ihfA	integration host factor subunit alpha
	?	NC_014034	= 2292995	188 (0.890)					coding (185/345 nt)	phaC	monovalent cation/proton antiporter subunit C
Rejected: Position hash score below cutoff.

GAGACGGTCAAGATCTCGTCCTTTGGCACGTTTTCCGTGCGCGACAAGACCTCGCGCATGGGGCGCAACCCGAAGACGGGCGAGGAAGTGCCGATTTCGCCGCGGCGGGT....................................................................................................  >  NC_014034/2066789‑2066898 ....................................................................................................CGCGGCGGGTTCATCGATCCGACCGCCTATGCCGATCCGCTGCCGCAGGCGCTGGTCCTGACGGCGATCGTCATCGGCTTTGCCGCGACGGCGCTGTTTCTGGTCGTGCT  <  NC_014034/2292995‑2292896                                                                                                                                                                                                                                                     TCCGTGCGCGACAAGACCTCGCGCATGGGGCGCAACCCGAAGACGGGCGAGGAAGTGCCGATTTCGCCGCGGCGGGTTCATCGATCCGACCGCCTATGCCG                                                                              >  1:366667/1‑101 (MQ=255)                                                     CGCGCATGGGGCGCAACCCGAAGACGGGCGAGGAAGTGCCGATTTCGCCGCGGCGGGTTCATCGATCCGACCGCCTATGCCGATCCGCTGCCGCAGGCGCT                                                           <  2:366616/101‑1 (MQ=255)                                                                                                                                                                                                                    GAGACGGTCAAGATCTCGTCCTTTGGCACGTTTTCCGTGCGCGACAAGACCTCGCGCATGGGGCGCAACCCGAAGACGGGCGAGGAAGTGCCGATTTCGCCGCGGCGGGT....................................................................................................  >  NC_014034/2066789‑2066898 ....................................................................................................CGCGGCGGGTTCATCGATCCGACCGCCTATGCCGATCCGCTGCCGCAGGCGCTGGTCCTGACGGCGATCGTCATCGGCTTTGCCGCGACGGCGCTGTTTCTGGTCGTGCT  <  NC_014034/2292995‑2292896 Base quality scores:  ATCG  < 3 ≤  ATCG  < 12 ≤  ATCG  < 22 ≤  ATCG  < 29 ≤  ATCG  < 37 ≤  ATCG