New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 207209197 (1.010)2 (0.010) 2/184 31.5 0.01 coding (270/678 nt) RCAP_rcc00175 hypothetical protein
?NC_014034 3270211 = 201 (0.950)coding (563/1287 nt) RCAP_rcc03077 capsule polysaccharide modification protein family
Rejected: Position hash score below cutoff.

GGCACGATCCGCGCGAAGGTCGGGGCCAGCGCGGATTTCAGCGCAAAGGCTTCAAGCGGCGTGCGCAGCAGGCAGAATTCCTCGCTGCTGATGACCATCTCCGGGGCG....................................................................................................  >  NC_014034/207102‑207209
....................................................................................................CCGGGGCGTCCCGGTCTTTGACGAATTCCGGCTGTACCTGCGCCGGTTGCTGCTGATGCCGGTGCAGGCGCTGGAACGGATGCTGGCGACGCGGCGGGTGCGGCGCTC  >  NC_014034/3270211‑3270310
                                                                                                                                                                                                                
                                         CGCAAAGGCTTCAAGCGGCGTGCGCAGCAGGCAGAATTCCTCGCTGCTGATGACCATCTCCGGGGCGTCCCGGTCTTTGACGAATTCCGGCTGTACCTGCG                                                                    >  1:2285464/1‑101 (MQ=255)
                                                              GCGCAGCAGGCAGAATTCCTCGCTGCTGATGACCATCTCCGGGGCGTCCCGGTCTTTGACGAATTCCGGCTGTACCTGCGCCGGTTGCTGCTGATGCCGGT                                               <  2:2285296/101‑1 (MQ=255)
                                                                                                                                                                                                                
GGCACGATCCGCGCGAAGGTCGGGGCCAGCGCGGATTTCAGCGCAAAGGCTTCAAGCGGCGTGCGCAGCAGGCAGAATTCCTCGCTGCTGATGACCATCTCCGGGGCG....................................................................................................  >  NC_014034/207102‑207209
....................................................................................................CCGGGGCGTCCCGGTCTTTGACGAATTCCGGCTGTACCTGCGCCGGTTGCTGCTGATGCCGGTGCAGGCGCTGGAACGGATGCTGGCGACGCGGCGGGTGCGGCGCTC  >  NC_014034/3270211‑3270310

Base quality scores:  ATCG  < 3 ≤  ATCG  < 33 ≤  ATCG  < 34 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG