New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 2115569 =13 (0.070)2 (0.010) 2/184 31.5 0.02 coding (310/1023 nt) lspL2 UDP‑glucuronate 5'‑epimerase
?NC_014034 2712979 = 193 (0.910)coding (235/792 nt) RCAP_rcc02524 pyrimidine ABC transporter ATP‑binding protein
Rejected: Position hash score below cutoff.

AAGATCAGCCCCGTTTCGATGCCGTGGCCGACGCCTTCCGCCCCGAGGTGATCGTGCATCTGGCCGCCCAGGCCGGGGTCCGCTACAGCCTGGAAAATCCGCGCGCCT....................................................................................................  <  NC_014034/2115676‑2115569
....................................................................................................GCGCGCCTCCTCGGGCGGGATCGAATTCACCGTCAGCGTGCCGCTGGTCGGGTGTTCCAGCGCCGCGATGCAGCGCAGGAAGGTGGTCTTGCCGCAACCCGAGGGACC  >  NC_014034/2712979‑2713078
                                                                                                                                                                                                                
                                 CCTTCCGCCCCGAGGTGATCGTGCATCTGGCCGCCCAGGCCGGGGTCCGCTACAGCCTGGAAAATCCGCGCGCCTCCTCGGGCGGGATCGAATTCACCGTC                                                                            >  1:1312589/1‑101 (MQ=1)
                                                                            GGTCCGCTACAGCCTGGAAAATCCGCGCGCCTCCTCGGGCGGGATCGAATTCACCGTCAGCGTGCCGCTGGTCGGGTGTTCCAGCGCCGCGATGCAGCGCA                                 <  2:1312493/101‑1 (MQ=1)
                                                                                                                                                                                                                
AAGATCAGCCCCGTTTCGATGCCGTGGCCGACGCCTTCCGCCCCGAGGTGATCGTGCATCTGGCCGCCCAGGCCGGGGTCCGCTACAGCCTGGAAAATCCGCGCGCCT....................................................................................................  <  NC_014034/2115676‑2115569
....................................................................................................GCGCGCCTCCTCGGGCGGGATCGAATTCACCGTCAGCGTGCCGCTGGTCGGGTGTTCCAGCGCCGCGATGCAGCGCAGGAAGGTGGTCTTGCCGCAACCCGAGGGACC  >  NC_014034/2712979‑2713078

Base quality scores:  ATCG  < 3 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG