New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 2218419	177 (0.950)	2 (0.010)	2/176	30.8	0.01	coding (1145/1932 nt)	RCAP_rcc02060	hemolysin‑type calcium‑binding repeat family protein
	?	NC_014034	2543564 =	213 (1.010)					coding (466/1251 nt)	RCAP_rcc02371	monosacharide ABC transporter permease
Rejected: Position hash score below cutoff.

CCCGCCGGTCACCGTCGGAAAGGTGATCACCGCATTGCCATTGGCGTCCGAGCCGATCACCGCATCGTCCCAGTTCACCGGATTGCCCTGATCGTCGCGCAGCCCCGAGA....................................................................................................  >  NC_014034/2218310‑2218419 ..................................................................................................GCAGCCCCGAGAGGGTGGAAACGAAACTCGGCATGGTGAAGCGGTTCAGAAGCGTCGCATAGATCGCCCCCATCGTCGCCCCGGCCGAAAGCGCCGCCAGAATGGCCAGCGG  >  NC_014034/2543564‑2543663                                                                                                                                                                                                                                                                                   gatcTCCCAGTTCACCGGATTGCCCTGATCGTCGCGCAGCCCCGAGAGGGTGGAAACGAAACTCGGCATGGTGAAGCGGTTCAGAAGCGTCGCATAGATCG                                                <  1:465963/97‑1 (MQ=255)                                                                     CCCAGTTCACCGGATTGCCCTGATCGTCGCGCAGCCCCGAGAGGGTGGAAACGAAACTCGGCATGGTGAAGCGGTTCAGAAGCGTCGCATAGATCGagatc                                           >  2:465906/1‑96 (MQ=255)                                                                                                                                                                                                                    CCCGCCGGTCACCGTCGGAAAGGTGATCACCGCATTGCCATTGGCGTCCGAGCCGATCACCGCATCGTCCCAGTTCACCGGATTGCCCTGATCGTCGCGCAGCCCCGAGA....................................................................................................  >  NC_014034/2218310‑2218419 ..................................................................................................GCAGCCCCGAGAGGGTGGAAACGAAACTCGGCATGGTGAAGCGGTTCAGAAGCGTCGCATAGATCGCCCCCATCGTCGCCCCGGCCGAAAGCGCCGCCAGAATGGCCAGCGG  >  NC_014034/2543564‑2543663 Base quality scores:  ATCG  < 3 ≤  ATCG  < 24 ≤  ATCG  < 29 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG