New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	221968 =	645 (3.080)	16 (0.080)	2/198	32.7	0.03	coding (689/2748 nt)	RCAP_rcc00185	hypothetical protein
	?	NC_014034	= 222119	333 (1.570)					coding (538/2748 nt)	RCAP_rcc00185	hypothetical protein
Rejected: Position hash score below cutoff.

CCTACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGA.....................................................  <  NC_014034/222065‑221968 ...................................................................................................CCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACGGACCCGACCG  <  NC_014034/222119‑222068                                                                                                   |                                                     CCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGAGCC                                                    >  1:3687915/1‑101 (MQ=0)                                        ACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGAC             >  1:3863399/1‑101 (MQ=17)                                           GACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCAGGGATCCGACGGA          >  2:1776942/1‑101 (MQ=0)                                            ACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCCCGGATCCGACCGATCCCACGGATCCGACGGcc         >  2:2277375/1‑99 (MQ=0)                                              CCGACCGATCCCACGGATCCGTCCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCC       <  1:2992/101‑1 (MQ=0)                                               CGACCGATCCCACGGATCCGACCGATNNNANGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCCc      <  1:2271895/101‑2 (MQ=2)                                               CGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCCc      <  1:2452113/101‑2 (MQ=11)                                               CGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCCc      <  1:281940/101‑2 (MQ=1)                                               CGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCCc      <  2:991756/101‑2 (MQ=11)                                               CGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGAGCCGACCGATCCCACGGAGCCGACCGATCCCACGGACCCGACCGACCCa      >  2:3549721/1‑100 (MQ=0)                                                GACCGATCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCCca     <  2:2415949/101‑3 (MQ=14)                                                 ACCGATCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCCCAC    <  1:3003182/101‑1 (MQ=17)                                                  CCGATCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCCCACg   <  1:853893/101‑2 (MQ=17)                                                  CCGATCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCCCACg   <  2:3759518/101‑2 (MQ=14)                                                   CGATCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCCCACgg  >  1:4071415/1‑99 (MQ=17)                                                   CGATCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCCCACgg  >  2:3743156/1‑99 (MQ=17)                                                                                                   |                                                     CCTACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGA.....................................................  <  NC_014034/222065‑221968 ...................................................................................................CCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACGGACCCGACCG  <  NC_014034/222119‑222068 Base quality scores:  ATCG  < 3 ≤  ATCG  < 17 ≤  ATCG  < 24 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG