New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 2241400172 (0.880)2 (0.010) 2/184 31.5 0.01 coding (1131/2040 nt) RCAP_rcc02074 ferredoxin domain‑containing protein
?NC_014034 3476183 = 192 (0.910)coding (344/1569 nt) nifE nitrogenase molybdenum‑iron biosynthesis protein NifE
Rejected: Position hash score below cutoff.

TCAAAGGCCGGGCCGGTGGGCGAGGAACAGGCCAGAACCCGGGTGCTGTTGCCCAGAAGGATCTCGGCATTGGTGCCGACATCGACGATCAGCGACAGATCCTCGCGG....................................................................................................  >  NC_014034/2241293‑2241400
....................................................................................................CCTCGCGGAGCGCGCGGTAAAGTTTCTTCTCGCCGTGGCCCATGACGATGTCGAGTTCCGACAGATCGGTGGTGAAGCCCTTGCGGTAAAGCTCCGAGCCCGACGAGG  >  NC_014034/3476183‑3476282
                                                                                                                                                                                                                
                                                                CGGCATTGGTGCCGACATCGACGATCAGCGACAGATCCTCGCGGAGCGCGCGGTAAAGTTTCTTCTCGCCGTGGCCCATGACGATGTCGAGTTCCGACAGA                                             >  2:536714/1‑101 (MQ=255)
                                                                          GCCGACATCGACGATCAGCGACAGATCCTCGCGGAGCGCGCGGTAAAGTTTCTTCTCGCCGTGGCCCATGACGATGTCGAGTTCCGACAGATCGGTGGTGA                                   <  1:536778/101‑1 (MQ=255)
                                                                                                                                                                                                                
TCAAAGGCCGGGCCGGTGGGCGAGGAACAGGCCAGAACCCGGGTGCTGTTGCCCAGAAGGATCTCGGCATTGGTGCCGACATCGACGATCAGCGACAGATCCTCGCGG....................................................................................................  >  NC_014034/2241293‑2241400
....................................................................................................CCTCGCGGAGCGCGCGGTAAAGTTTCTTCTCGCCGTGGCCCATGACGATGTCGAGTTCCGACAGATCGGTGGTGAAGCCCTTGCGGTAAAGCTCCGAGCCCGACGAGG  >  NC_014034/3476183‑3476282

Base quality scores:  ATCG  < 3 ≤  ATCG  < 33 ≤  ATCG  < 34 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG