New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 2285513 =NA (NA)5 (0.030) 4/182 29.1 0.05 intergenic (‑22/+49) RCAP_rcc02123/actP2 cyclic nucleotide‑binding domain‑/cystathionine beta‑synthase domain‑/unknown function domain‑containing protein/cation/acetate symporter ActP
?NC_014034 3241319 = 205 (0.970)coding (158/600 nt) rplY 50S ribosomal protein L25
Rejected: Position hash score below cutoff.

GAGATCCGTTCGGAAACCGGCATCGGCGCCGCCGAAGCCTCGGCGCATTGATCCGGCGGCGGGCGGGGTCCTCCCCGCCCGTTCCCCCGCCTTCACGGGCCCCGCCTGC..................................................................................................  <  NC_014034/2285612‑2285513
....................................................................................................CCCGCCTGCGCAAGGGCCGGTTCCTGTCGACGCTGTTCAACCTGCACATCGAAGGTCAGGACGACGTCCGCGTGATCTGCCGCGGCGTGCAGAAAGACGTGGTGAAG  >  NC_014034/3241319‑3241425
                                                                                                                                                                                                               
                                  AAGCCTCGGCGCATTGATCCGGCGGCGGGCGGGGTCCTCCCCGCCCGTTCCCCCGCCTTCACGGGCCCCGCCTGCGCAAGGGCCGGTTCCTGTCGACGCTG                                                                          >  2:421103/1‑101 (MQ=255)
                                                                       cCCCCGCCCGTTCCCCCGCCTTCCCGGGCCCCGCCTGCGCAAGGGCCGGTTCCTGTCGACGCTGTTCAACCTGCACATCGAAGGTCAGGACGACGTCCGCG                                     <  1:421154/100‑1 (MQ=255)
                                                                                               gctGCCCCGCCTGCGCAAGGGCCGGTTCCTGTCGACGCTGTTCAACCTGCACATCGAAGGTCAGGACGACGTCCGCGTGATCTGCCGCGGCGTGCAGAAAG             <  1:1728063/98‑1 (MQ=255)
                                                                                                ctGCCCCGCCTGCGCAAGGGCCGGTTCCTGTCGACGCTGTTCAACCTGCACATCGAAGGTCAGGACGACGTCCGCGTGATCTGCCGCGGCGTGCAGAAAGA            <  1:262500/99‑1 (MQ=255)
                                                                                                 tGCCCCGCCTGCGCAAGGGCCGGTTCCTGTCGACGCTGTTCAACCTGCACATCGAAGGTCAGGACGACGTCCGCGTGATCTGCCGCGGCGTGCAGAAAGAC           <  2:1362111/100‑1 (MQ=255)
                                                                                                                                                                                                               
GAGATCCGTTCGGAAACCGGCATCGGCGCCGCCGAAGCCTCGGCGCATTGATCCGGCGGCGGGCGGGGTCCTCCCCGCCCGTTCCCCCGCCTTCACGGGCCCCGCCTGC..................................................................................................  <  NC_014034/2285612‑2285513
....................................................................................................CCCGCCTGCGCAAGGGCCGGTTCCTGTCGACGCTGTTCAACCTGCACATCGAAGGTCAGGACGACGTCCGCGTGATCTGCCGCGGCGTGCAGAAAGACGTGGTGAAG  >  NC_014034/3241319‑3241425

Base quality scores:  ATCG  < 3 ≤  ATCG  < 18 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG