New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 2287237 =NA (NA)2 (0.010) 2/180 31.1 0.02 coding (62/1737 nt) actP2 cation/acetate symporter ActP
?NC_014034 = 2763053 221 (1.040)coding (601/750 nt) RCAP_rcc02576 BRO family protein
Rejected: Position hash score below cutoff.

GACGAGCTGACCGCCCAGGTGAAGCGCGAGGTGCTGAAATGAGCCCGGTCACGACCTTCACCCGCCTTGCGGCGGTCTCGGCGCTGAGCCTGACGCCCGGCCTTGCCCTT....................................................................................................  <  NC_014034/2287336‑2287237
....................................................................................................CCTTGCCCTTCGTGACCCACTTGCGATGTTCAAGGAAGCCGTAGAGGTCCACCCGCTTCGCTTTCAGGGCCTTGGCGGCCTCGGTGACGGTCATAGACCCCGTGGCCTCT  <  NC_014034/2763053‑2762944
                                                                                                                                                                                                                  
                                      ATGAGCCCGGTCACGACCTTCACCCGCCTTGCGGCGGTCTCGGCGCTGAGCCTGACGCCCGGCCTTGCCCTTCGTGACCCACTTGCGATGTTCAAGGAAGC                                                                         >  2:722689/1‑101 (MQ=255)
                                                                        CGGTCTCGGCGCTGAGCCTGACGCCCGGCCTTGCCCTTCGTGACCCACTTGCGATGTTCAAGGAAGCCGTAGAGGTCCACCCGCTTCGCTTTCAGGGCCTT                                       <  1:722765/101‑1 (MQ=255)
                                                                                                                                                                                                                  
GACGAGCTGACCGCCCAGGTGAAGCGCGAGGTGCTGAAATGAGCCCGGTCACGACCTTCACCCGCCTTGCGGCGGTCTCGGCGCTGAGCCTGACGCCCGGCCTTGCCCTT....................................................................................................  <  NC_014034/2287336‑2287237
....................................................................................................CCTTGCCCTTCGTGACCCACTTGCGATGTTCAAGGAAGCCGTAGAGGTCCACCCGCTTCGCTTTCAGGGCCTTGGCGGCCTCGGTGACGGTCATAGACCCCGTGGCCTCT  <  NC_014034/2763053‑2762944

Base quality scores:  ATCG  < 3 ≤  ATCG  < 26 ≤  ATCG  < 30 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG