New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 2379667 =185 (0.910)2 (0.010) 2/192 32.2 0.01 coding (87/837 nt) eutJ ethanolamine utilization protein EutJ
?NC_014034 3106145 = 152 (0.720)coding (136/3117 nt) RCAP_rcc02907 hypothetical protein
Rejected: Position hash score below cutoff.

AGGTCTGAGGGGTTATCATGTCCGGCATCGACGCCATCCTGCACGACTTCGCCGCCCTGGTGCGGCAAGGCGATTGCCTGCCGCCCGAGGCACGGGCACAGGGC..................................................................................................  <  NC_014034/2379770‑2379667
....................................................................................................GGGCGCCCGTTGAGGATCGCAACGACCGGCACGTCCCGCGGCGCCAGCGCCCGGATTCGCACCCGGCGGCGCAGGACCGCGACCTCGCGCGAGCGCAGCGGA  >  NC_014034/3106145‑3106242
                                                                                                                                                                                                          
                                                               GGCAAGGCGATTGCCTGCCGCCCGAGGCACGGGCACAGGGCGCCCGTTGAGGATCGCAACGACCGGCACGTCCCGCGGCGCCAGCGCCCGGATTCGCACCC                                        >  2:2391352/1‑101 (MQ=255)
                                                                 CAAGGCGATTGCCTGCCGCCCGAGGCACGGGCACAGGGCGCCCGTTGAGGATCGCAACGACCGGCACGTCCCGCGGCGCCAGCGCCCGGATTCGCACCCGG                                      <  1:2391528/101‑1 (MQ=255)
                                                                                                                                                                                                          
AGGTCTGAGGGGTTATCATGTCCGGCATCGACGCCATCCTGCACGACTTCGCCGCCCTGGTGCGGCAAGGCGATTGCCTGCCGCCCGAGGCACGGGCACAGGGC..................................................................................................  <  NC_014034/2379770‑2379667
....................................................................................................GGGCGCCCGTTGAGGATCGCAACGACCGGCACGTCCCGCGGCGCCAGCGCCCGGATTCGCACCCGGCGGCGCAGGACCGCGACCTCGCGCGAGCGCAGCGGA  >  NC_014034/3106145‑3106242

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 39 ≤  ATCG