New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 2401662189 (0.970)2 (0.010) 2/184 31.5 0.01 coding (84/105 nt) RCAP_rcc02230 hypothetical protein
?NC_014034 3161274 = 194 (0.920)coding (548/873 nt) atpG ATP synthase F1 subunit gamma
Rejected: Position hash score below cutoff.

GACCCGCCCGGTGGAGAAAAGCGCATGAGACAGCTGTTCTGGCGCCCGCCCACCCTGCGCGACCGGCTGCTGCTTGGCCTGCTTCTGGCGGGCTGGGCGGGGCTGATC....................................................................................................  >  NC_014034/2401555‑2401662
....................................................................................................GGCTGATCACGCTCTGGAAGACCGAGAAGAAGATCGTCGCCACATCGTATTCGCCCGCCTCGAAGCGGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGC  >  NC_014034/3161274‑3161373
                                                                                                                                                                                                                
                                                               CGGCTGCTGCTTGGCCTGCTTCTGGCGGGCTGGGCGGGGCTGATCACGCTCTGGAAGACCGAGAAGAAGATCGTCGCCACATCGTATTCGCCCGCCTCGAA                                              >  2:1592259/1‑101 (MQ=255)
                                                                          TGGCCTGCTTCTGGGGGGCTGGGCGGGGCTGATCACGCTCTGGAAGACCGAGAAGAAGATCGTCGCCACATCGTATTCGCCCGCCTCGAAGCGGTCGATGA                                   <  1:1592368/101‑1 (MQ=255)
                                                                                                                                                                                                                
GACCCGCCCGGTGGAGAAAAGCGCATGAGACAGCTGTTCTGGCGCCCGCCCACCCTGCGCGACCGGCTGCTGCTTGGCCTGCTTCTGGCGGGCTGGGCGGGGCTGATC....................................................................................................  >  NC_014034/2401555‑2401662
....................................................................................................GGCTGATCACGCTCTGGAAGACCGAGAAGAAGATCGTCGCCACATCGTATTCGCCCGCCTCGAAGCGGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGC  >  NC_014034/3161274‑3161373

Base quality scores:  ATCG  < 3 ≤  ATCG  < 10 ≤  ATCG  < 20 ≤  ATCG  < 31 ≤  ATCG  < 41 ≤  ATCG