New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 2533179 =200 (1.030)2 (0.010) 2/184 31.5 0.01 coding (22/2154 nt) RCAP_rcc02362 competence protein
?NC_014034 = 2780806 192 (0.910)coding (584/1257 nt) RCAP_rcc02591 surface presentation of antigens protein family
Rejected: Position hash score below cutoff.

GAGACCGCGTTTTAACCTTTTGGAAACCATGATGCCCGTAGGCTAGCTTGAGCGTTTCTCTAATGCAGGAGGGGGCGACAGGACAAGTGGCGCAGGCATCGGCGGTGC....................................................................................................  <  NC_014034/2533286‑2533179
....................................................................................................GGCGGTGCCGGTGAACGGGCGCGGCCATTCGCTGCGCCGTCTGCCGGGGCTTGCCGACGAAGGGCCGATCAGCCCCGACCGCGAGGCCGCGGAATGGGCGCATCGGCT  <  NC_014034/2780806‑2780707
                                                                                                                                                                                                                
                                TGCCCGTAGGCTAGCTTGAGCGTTTCTCTAATGCAGGAGGGGGCGACAGGACAAGTGGCGCAGGCATCGGCGGTGCCGGTGAACGGGCGCGGCCATTCGCT                                                                             >  2:143190/1‑101 (MQ=255)
                                                               TGCAGGAGGGGGCGACAGGACAAGTGGCGCAGGCATCGGCGGTGCCGGTGAACGGGCGCGGCCATTCGCTGCGCCGTCTGCCGGGGCTTGCCGACGAAGGG                                              <  1:143214/101‑1 (MQ=255)
                                                                                                                                                                                                                
GAGACCGCGTTTTAACCTTTTGGAAACCATGATGCCCGTAGGCTAGCTTGAGCGTTTCTCTAATGCAGGAGGGGGCGACAGGACAAGTGGCGCAGGCATCGGCGGTGC....................................................................................................  <  NC_014034/2533286‑2533179
....................................................................................................GGCGGTGCCGGTGAACGGGCGCGGCCATTCGCTGCGCCGTCTGCCGGGGCTTGCCGACGAAGGGCCGATCAGCCCCGACCGCGAGGCCGCGGAATGGGCGCATCGGCT  <  NC_014034/2780806‑2780707

Base quality scores:  ATCG  < 3 ≤  ATCG  < 29 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG