New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 2556557152 (0.760)2 (0.010) 2/188 31.8 0.01 coding (391/1065 nt) RCAP_rcc02384 Mrp/NBP35 family protein
?NC_014034 2758820 = 233 (1.100)coding (309/315 nt) RCAP_rcc02568 hypothetical protein
Rejected: Position hash score below cutoff.

GACCATCGGGCGAGGCGGGCTTTTCGGTGGCCCCCATCATCCGCGGCTGGCTGGGCCCGTAAAGATCGGCATCGAGCAGCCCCACCCTTTTGCCCGCCCGCGCCAA....................................................................................................  >  NC_014034/2556452‑2556557
....................................................................................................CGCCAAGCACTGACACAGCCAACCGATAGGAAACCGCCATGACCACCACCACGACCCCTGAAGCCGCCACCCTGAACGCCCTTCTGGCCGCTGCCGGGGACCGCCT  >  NC_014034/2758820‑2758919
                                                                                                                                                                                                              
                                                            atctATCGGCATCGAGCAGCCCCACCCTTTTGCCCGCCCGCGCCAAGCACTGACACAGCCAACCGATAGGAAACCGCCATGACCACCACCACGACCCCTGA                                               <  1:1094125/97‑1 (MQ=255)
                                                                ATCGGCATCGAGCAGCCCCACCCTTTTGCCCGCCCGCGCCAAGCACTGACACAGCCAACCGATAGGAAACCGCCATGACCACCACCACGACCCCTGAAGat                                           >  2:1094031/1‑99 (MQ=255)
                                                                                                                                                                                                              
GACCATCGGGCGAGGCGGGCTTTTCGGTGGCCCCCATCATCCGCGGCTGGCTGGGCCCGTAAAGATCGGCATCGAGCAGCCCCACCCTTTTGCCCGCCCGCGCCAA....................................................................................................  >  NC_014034/2556452‑2556557
....................................................................................................CGCCAAGCACTGACACAGCCAACCGATAGGAAACCGCCATGACCACCACCACGACCCCTGAAGCCGCCACCCTGAACGCCCTTCTGGCCGCTGCCGGGGACCGCCT  >  NC_014034/2758820‑2758919

Base quality scores:  ATCG  < 3 ≤  ATCG  < 25 ≤  ATCG  < 29 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG