New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 255961 =205 (1.010)2 (0.010) 2/192 32.2 0.01 coding (1610/2715 nt) secA preprotein translocase subunit SecA
?NC_014034 = 625823 188 (0.890)intergenic (+14/‑250) anfA/anfH nitrogen fixation regulatory protein AnfA/nitrogenase iron protein
Rejected: Position hash score below cutoff.

GCCCGAGCGGCCGCGCAGCTGGTTGTCGATCCGGCGGCTTTCGTGGCGTTCGGTGGCCAGAACGAACAGGCCCCCGGCCTCGATCACCTTCTGCTTTTCCTCGG....................................................................................................  <  NC_014034/256064‑255961
....................................................................................................TCGGTCATTGGCCGTCGATCAGGCCGAAGCGCGATACCGGTGCGGGTCGATGCCGAGCCGCCCCATCCGCAGGCCCAGCACCCGGCGCGAGACCTGCAAAAGCT  <  NC_014034/625823‑625724
                                                                                                                                                                                                            
                                  CGGCTTTCGTGGCGTTCGGTGGCCAGAACGAACAGGCCCCCGGCCTCGATCACCTTCTGCTTTTCCTCGGTCATTGGCCGTCGATCAGGCCGAAGCGCGAT                                                                       >  2:1693946/1‑101 (MQ=255)
                                                         CAGAACGAACAGGCCCCCGGCCTCGATCACCTTCTGCTTTTCCTCGGTCATTGGCCGTCGATCAGGCCGAAGCGCGATAGCGGTGCGGGTCGATGCCGAGC                                                <  1:1694061/101‑1 (MQ=255)
                                                                                                                                                                                                            
GCCCGAGCGGCCGCGCAGCTGGTTGTCGATCCGGCGGCTTTCGTGGCGTTCGGTGGCCAGAACGAACAGGCCCCCGGCCTCGATCACCTTCTGCTTTTCCTCGG....................................................................................................  <  NC_014034/256064‑255961
....................................................................................................TCGGTCATTGGCCGTCGATCAGGCCGAAGCGCGATACCGGTGCGGGTCGATGCCGAGCCGCCCCATCCGCAGGCCCAGCACCCGGCGCGAGACCTGCAAAAGCT  <  NC_014034/625823‑625724

Base quality scores:  ATCG  < 3 ≤  ATCG  < 31 ≤  ATCG  < 34 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG