New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 26009490 (0.000)96 (0.480) 21/188 18.3 0.49 intergenic (+11/‑130) RCAP_rcc02424/surE short‑chain dehydrogenase/reductase family oxidoreductase/5'‑nucleotidase SurE
?NC_014034 = 2941070 201 (0.950)intergenic (‑733/+10) RCAP_rcc02750/RCAP_rcc02751 hypothetical protein/N‑acetylmuramoyl‑L‑alanine amidase, family 2
Rejected: Position hash score below cutoff.

ACCGCCGTGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGG....................................................................................................  >  NC_014034/2600846‑2600949
..................................................................................................GGGGGGCTCTGCCCCCCGGCTGCGCCTCCCCCCGGGATATTTCCGGCAAGATGAAAGCCAAACCCGGCCTTCCCTTCATCTTGCTCCAAATATCCCGGGGGTATGG  <  NC_014034/2941070‑2940971
                                                                                                                                                                                                            
    cgGTGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGTGAAACGCCTTCTTACCGAGATCTGACGGACGGGGGGC                                                                                                     <  2:2650736/99‑1 (MQ=0)
    CCGTGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGC                                                                                                     <  1:4133126/101‑1 (MQ=1)
    CCGTGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGC                                                                                                     <  1:3258705/101‑1 (MQ=1)
     CGTGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCT                                                                                                    <  1:661193/101‑1 (MQ=1)
     CGTGCGGGCACGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCT                                                                                                    >  2:3951303/1‑101 (MQ=1)
      GTGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTC                                                                                                   >  2:944875/1‑101 (MQ=1)
      GTGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTC                                                                                                   >  2:3054074/1‑101 (MQ=1)
      GTGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTC                                                                                                   <  2:4110648/101‑1 (MQ=1)
       TGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCT                                                                                                  <  2:1698435/101‑1 (MQ=1)
       TGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCT                                                                                                  >  2:2948988/1‑101 (MQ=1)
       TGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCT                                                                                                  <  1:2921195/101‑1 (MQ=1)
        GCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTG                                                                                                 <  1:1596226/101‑1 (MQ=1)
        GCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTG                                                                                                 >  1:2865566/1‑101 (MQ=1)
        GCGCGCGCGCTTCTTCCGGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGAGGCTCTG                                                                                                 <  2:3401417/101‑1 (MQ=0)
          GGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCC                                                                                               <  2:2202094/101‑1 (MQ=1)
            GCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCC                                                                                             <  2:205415/101‑1 (MQ=1)
            GCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCC                                                                                             <  1:3071558/101‑1 (MQ=1)
             CGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCC                                                                                            <  1:1153810/101‑1 (MQ=1)
             CGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCC                                                                                            <  1:2119152/101‑1 (MQ=1)
              GCGCTTTTCCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCC                                                                                           <  1:709968/101‑1 (MQ=0)
              GCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGTGGCTCTGCCCCCC                                                                                           >  1:2800573/1‑101 (MQ=1)
              GCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCC                                                                                           <  2:2859968/101‑1 (MQ=1)
              GCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCC                                                                                           <  1:2700997/101‑1 (MQ=1)
              GCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCC                                                                                           <  2:53145/101‑1 (MQ=1)
              GCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCC                                                                                           <  1:619148/101‑1 (MQ=1)
               CGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCG                                                                                          <  1:3491404/101‑1 (MQ=1)
               CGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCG                                                                                          >  2:70574/1‑101 (MQ=1)
                GCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGG                                                                                         >  1:953562/1‑101 (MQ=1)
                GCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGG                                                                                         <  1:3735395/101‑1 (MQ=1)
                 CTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGAGGGACGGGGGGCTCTGCCCCCCGGC                                                                                        >  2:491756/1‑101 (MQ=1)
                 CTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGC                                                                                        <  2:16401/101‑1 (MQ=1)
                  TTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCT                                                                                       >  1:4133838/1‑101 (MQ=1)
                  TTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCT                                                                                       >  1:3139348/1‑101 (MQ=1)
                   TCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGGGCTGCCCCCCCGCTt                                                                                      >  2:468859/1‑100 (MQ=0)
                   TCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTt                                                                                      <  1:1736586/101‑2 (MQ=1)
                   TCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTt                                                                                      >  1:1838584/1‑100 (MQ=1)
                   TCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTt                                                                                      <  1:385319/101‑2 (MQ=1)
                    CTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTtc                                                                                     >  2:1571067/1‑99 (MQ=1)
                    CTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTtc                                                                                     <  1:421916/101‑3 (MQ=1)
                    CTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTtc                                                                                     <  1:4178839/101‑3 (MQ=1)
                     TTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCG                                                                                    <  2:3768481/101‑1 (MQ=1)
                     TTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCG                                                                                    <  2:2727762/101‑1 (MQ=1)
                     TTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCG                                                                                    >  2:1021469/1‑101 (MQ=1)
                     TTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCG                                                                                    >  2:2788720/1‑101 (MQ=1)
                     TTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCCGCTTCG                                                                                    >  1:873441/1‑101 (MQ=1)
                       CCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCGCt                                                                                  <  1:1283864/101‑2 (MQ=1)
                       CCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCGCt                                                                                  <  2:2087262/101‑2 (MQ=1)
                        CCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCGCtc                                                                                 >  2:3952815/1‑99 (MQ=1)
                        CCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCGCtc                                                                                 >  2:1901922/1‑99 (MQ=1)
                        CCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCGCtc                                                                                 <  2:1271390/101‑3 (MQ=1)
                         CGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCGCtcc                                                                                <  2:1095802/101‑4 (MQ=1)
                          GTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCGCtccc                                                                               >  2:776940/1‑97 (MQ=1)
                          GTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCGCtccc                                                                               >  2:3129711/1‑97 (MQ=1)
                          GTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCGCtccc                                                                               <  1:1869996/101‑5 (MQ=1)
                            CCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCG.CTCCCCC                                                                            >  2:1306203/1‑101 (MQ=1)
                            CCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCG.CTCCCCC                                                                            <  2:4101887/101‑1 (MQ=1)
                             CGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCG.CTCCCCCC                                                                           <  2:3198719/101‑1 (MQ=1)
                              GAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCG.CTCCCCCCG                                                                          >  2:2754886/1‑101 (MQ=1)
                              GAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCG.CTCCCCCCG                                                                          <  2:639989/101‑1 (MQ=1)
                              GAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCG.CTCCCCCCG                                                                          <  2:1288412/101‑1 (MQ=1)
                               AGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCG.CTCCCCCCGG                                                                         >  2:3532468/1‑101 (MQ=1)
                               AGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCG.CTCCCCCCGG                                                                         >  1:3555742/1‑101 (MQ=1)
                               AGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCG.CTCCCCCCGG                                                                         >  1:3178117/1‑101 (MQ=1)
                               AGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCG.CTCCCCCCGG                                                                         >  2:4214768/1‑101 (MQ=1)
                                GGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCG.CTCCCCCCGGG                                                                        <  1:2691392/101‑1 (MQ=1)
                                GGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCG.CTCCCCCCGGG                                                                        >  1:2084160/1‑101 (MQ=1)
                                GGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCG.CTCCCCCCGGG                                                                        <  1:1819062/101‑1 (MQ=1)
                                GGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCG.CTCCCCCCGGG                                                                        <  2:958544/101‑1 (MQ=1)
                                  ACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCG.CTCCCCCCGGGAT                                                                      <  1:4095414/101‑1 (MQ=1)
                                  ACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCG.CTCCCCCCGGGAT                                                                      <  1:3962196/101‑1 (MQ=1)
                                   CCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCG.CTCCCCCCGGGctt                                                                     >  2:541543/1‑98 (MQ=1)
                                   CCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCG.CTCCCCCCGGGATA                                                                     >  2:3325900/1‑101 (MQ=1)
                                     cCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCG.CTCCCCCCGGGATATT                                                                   <  2:4074416/100‑1 (MQ=1)
                                      CACGCCTCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCG.CTCCCCCCGGGATATTT                                                                  <  1:4149827/101‑1 (MQ=1)
                                      CACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCG.CTCCCCCCGGGATATTT                                                                  >  1:478422/1‑101 (MQ=1)
                                        CGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCG.CTCCCCCCGGGATATTTgc                                                                <  1:3892258/101‑3 (MQ=1)
                                           CGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCG.CTCCCCCCGGGATATTTGCGGC                                                             >  1:173393/1‑101 (MQ=1)
                                           CGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCG.CTCCCCCCGGGATATTTGCGGC                                                             >  2:2202174/1‑101 (MQ=1)
                                            GCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCG.CTCCCCCCGGGATATTTGCGGCA                                                            <  2:1932634/101‑1 (MQ=1)
                                            GCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCG.CTCCCCCCGGGATATTTGCGGCA                                                            <  1:1844837/101‑1 (MQ=1)
                                             CTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCG.CTCCCCCCGGGATATTTGCGGCAA                                                           >  2:3469874/1‑101 (MQ=1)
                                             CTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCG.CTCCCCCCGGGATATTTGCGGCAA                                                           >  2:1225500/1‑101 (MQ=1)
                                             CTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCG.CTCCCCCCGGGATATTTGCGGCAA                                                           >  2:1058616/1‑101 (MQ=1)
                                              TGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCG.CTCCCCCCGGGATATTTGCGGCAAG                                                          <  1:2873061/101‑1 (MQ=1)
                                               GATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCG.CTCCCCCCGGGATATTTGCGGCAAGA                                                         <  2:3516329/101‑1 (MQ=1)
                                                ATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCG.CTCCCCCCGGGATATTTGCGGCAAGAT                                                        <  2:995779/101‑1 (MQ=1)
                                                ATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCG.CTCCCCCCGGGATATTTGCGGCAAGAT                                                        <  1:923704/101‑1 (MQ=1)
                                                ATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCG.CTCCCCCCGGGATATTTGCGGCAAGAT                                                        <  1:3953065/101‑1 (MQ=1)
                                                ATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCG.CTCCCCCCGGGATATTTGCGGCAAGAT                                                        <  2:3759869/101‑1 (MQ=1)
                                                  CGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCG.CTCCCCCCGGGATATTTGCGGCAAGATGA                                                      <  1:1970927/101‑1 (MQ=1)
                                                  CGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCG.CTCCCCCCGGGATATTTGCGGCAAGATGA                                                      <  2:676566/101‑1 (MQ=1)
                                                  CGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCG.CTCCCCCCGGGATATTTGCGGCAAGATGA                                                      <  2:1957973/101‑1 (MQ=1)
                                                  CGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCG.CTCCCCCCGGGATATTTGCGGCAAGATGA                                                      >  2:387515/1‑101 (MQ=1)
                                                   GATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCG.CTCCCCCCGGGATATTTGCGGCAAGATGAA                                                     >  2:1096128/1‑101 (MQ=1)
                                                   GATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCG.CTCCCCCCGGGATATTTGCGGCAAGATGAA                                                     <  2:3192667/101‑1 (MQ=1)
                                                   GATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCG.CTCCCCCCGGGATATTTGCGGCAAGATGAA                                                     <  2:3287169/101‑1 (MQ=1)
                                                                                                                                                                                                            
ACCGCCGTGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGG....................................................................................................  >  NC_014034/2600846‑2600949
..................................................................................................GGGGGGCTCTGCCCCCCGGCTGCGCCTCCCCCCGGGATATTTCCGGCAAGATGAAAGCCAAACCCGGCCTTCCCTTCATCTTGCTCCAAATATCCCGGGGGTATGG  <  NC_014034/2941070‑2940971

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 39 ≤  ATCG