New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 264699 =178 (0.930)2 (0.010) 2/180 31.1 0.01 coding (494/579 nt) RCAP_rcc00227 hypothetical protein
?NC_014034 = 3181460 194 (0.920)coding (80/768 nt) hadH 3‑hydroxyacyl‑Coa dehydrogenase/3‑hydroxy‑2‑methylbutyryl‑CoA dehydrogenase
Rejected: Position hash score below cutoff.

GGCCAAGCAAAAGGGAACGTCGGTTCATGGGTCAGCCTTTCTCAGCTCGTCCCGCCGTCTGGCGGGTTTCATCAGGATGTTGCGGGCAAGGTCTTCCAGCGCCGCCCGCA....................................................................................................  <  NC_014034/264808‑264699
....................................................................................................GCCGCCCGCATCAACCACCATCCGCGCCACGGCCGCCCCCAGCCCCGAACCGCCCCCGGTGACGACAAAGACCCGCTCTGAAATCTGCATCCTTTCCTCCCTTTCCCTGA  <  NC_014034/3181460‑3181361
                                                                                                                                                                                                                  
                                    CTTTCTCAGCTCGTCCCGCCGTCTGGCGGGTTTCATCAGGATGTTGCGGGCAAGGTCTTCCAGCGCCGCCCGCATCAACCACCATCCGCGCCACGGCCGCC                                                                           >  2:100949/1‑101 (MQ=255)
                                                                               TTGCGGGCAAGGTCTTCCAGCGCCGCCCGCATCAACCACCATCCGCGCCACGGCCGCCCCCAGCCCCGAACCGCCCCCGGTGACGACAAAGACCCGCTCTG                                <  1:100973/101‑1 (MQ=255)
                                                                                                                                                                                                                  
GGCCAAGCAAAAGGGAACGTCGGTTCATGGGTCAGCCTTTCTCAGCTCGTCCCGCCGTCTGGCGGGTTTCATCAGGATGTTGCGGGCAAGGTCTTCCAGCGCCGCCCGCA....................................................................................................  <  NC_014034/264808‑264699
....................................................................................................GCCGCCCGCATCAACCACCATCCGCGCCACGGCCGCCCCCAGCCCCGAACCGCCCCCGGTGACGACAAAGACCCGCTCTGAAATCTGCATCCTTTCCTCCCTTTCCCTGA  <  NC_014034/3181460‑3181361

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 29 ≤  ATCG  < 33 ≤  ATCG  < 39 ≤  ATCG