New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 270080154 (0.780)7 (0.040) 4/186 29.4 0.04 intergenic (+91/+146) RCAP_rcc00233/RCAP_rcc00234 AFG1‑like ATPase/luciferase
?NC_014034 772492 = 150 (0.710)intergenic (+75/+146) RCAP_rcc00703/oppC1 deoxyribodipyrimidine photolyase‑related protein/oligopeptide ABC transporter permease OppC
Rejected: Position hash score below cutoff.

GCAGGAAAATCGGTAAGCAGCGGCTTCGGGTGCTTTGACCGAGGCCATCGCCGAGGTCACGCGCGACAATGGCCCCGTGACCGGCGAGGGCCCAAAGGCCCTCGGCC....................................................................................................  >  NC_014034/269974‑270080
....................................................................................................CTCGGCCAGCGCCCGCCCCGCCCCATGGCGGGCGCTTTCGAGCCGCCCGGGCCGGGCGCTGGCCTCTGTTGCACCTGGGATTGGCGGTCGTGTCGAGGCGTTGCGCT  >  NC_014034/772492‑772591
                                                                                                                                                                                                               
                                                                                            ttcAGGCCCTCGGCCAGCGCCCGCCCCGCCCCATGGCGGGCGCTTTCGAGCCGCCCGGGCCGGGCGCTGGCCTCTGTTGCACCTGGGATTGGCGGTCGTGT                <  2:4221631/98‑1 (MQ=1)
                                                                                              cAGGCCCTGGCCCAGCCCCCGCCCCGCCCCATGGCGGGCGCTTTCGAGCCGCCCGGGCCGGGCGCTGGCCTCTGTTGCACCTGGGATTGGCGGTCGTGTCG              <  1:3443858/100‑1 (MQ=0)
                                                                                               agcCCCTCGGCCAGCGCCCGCCCCGCCCCATGGCGGGCGCTTTCGAGCCGCCCGGGCCGGGCGCTGGCCTCTGTTGCACCTGGGATTGGCGGTCGTGTCGA             <  1:1027301/98‑1 (MQ=1)
                                                                                                GGCCCTCGGCCGGCCCCCGCCCCGCCCCATGGCGGGCGCTTTCGAGCCGCCCGGGCCGGGCGCTGGCCTCTGTTGCACCTGGGATTGGCGGTCGTGTCGAG            <  2:2183605/101‑1 (MQ=0)
                                                                                                GGCCCTCGCCCGGCGCCCGCCCCGCCCCATGGCGGGCGCTTTCGAGCCGCCCGGGCCGGGCGCTGGCCTCTGTTGCACCTGGGATTGGCGGTCGTGTCGAG            <  1:123203/101‑1 (MQ=0)
                                                                                                   CCTGGGCCAGCCCCCGCCCCGCCCCATGGCGGGCGCTTTCGAGCCGCCCGGGCCGGGCGCTGGCCTCTGTTGCACCTGGGATTGGCGGTCGTGTCGAGGCG         <  2:3617567/101‑1 (MQ=0)
                                                                                                   CCTCGCCCAGCGCCCGCCCCGCCCCATGGCGGGCGCTTTCGAGCCGCCCGGGCCGGGCGCTGGCCTCTGTTGCACCTGGGATTGGCGGTCGTGTCGAGGCG         <  1:1548745/101‑1 (MQ=1)
                                                                                                                                                                                                               
GCAGGAAAATCGGTAAGCAGCGGCTTCGGGTGCTTTGACCGAGGCCATCGCCGAGGTCACGCGCGACAATGGCCCCGTGACCGGCGAGGGCCCAAAGGCCCTCGGCC....................................................................................................  >  NC_014034/269974‑270080
....................................................................................................CTCGGCCAGCGCCCGCCCCGCCCCATGGCGGGCGCTTTCGAGCCGCCCGGGCCGGGCGCTGGCCTCTGTTGCACCTGGGATTGGCGGTCGTGTCGAGGCGTTGCGCT  >  NC_014034/772492‑772591

Base quality scores:  ATCG  < 3 ≤  ATCG  < 24 ≤  ATCG  < 31 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG