New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 2725699206 (1.050)2 (0.010) 2/186 31.7 0.01 coding (30/837 nt) cysT sulfate ABC transporter permease CysT
?NC_014034 3473103 = 238 (1.120)coding (15/471 nt) RCAP_rcc03277 hypothetical protein
Rejected: Position hash score below cutoff.

CCAGCCCGTAGCTGGCGCCCTGCGCCAAAAGCGCGCCGATCGGGCCCAGCACCACCAGCGACAGCATCGTCAGCGTGATCCCCATCGAGAGCCCCAGCCCCGGCATC....................................................................................................  >  NC_014034/2725593‑2725699
....................................................................................................CGGCATCCAGCGTCATCGTCATCAGACCTCTTCCTCTTCGAAATCGGCGGTGAAATCGGGTTTTTCCCAGGTGCCCAGAACCTTGCGCAGGAAGGGCGGCGGGGTGC  >  NC_014034/3473103‑3473202
                                                                                                                                                                                                               
                                GCGCCGATCGGGCCCAGCACCACCAGCGACAGCATCGTCAGCGTGATCCCCATCGAGAGCCCCAGCCCCGGCATCCAGCGTCATCGTCATCAGACCTCTTC                                                                            >  1:1744011/1‑101 (MQ=255)
                                   CCGATCGGGCCCAGCACCACCAGCGACAGCATCGTCAGCGTGATCCCCATCGAGAGCCCCAGCCCCGGCATCCAGCGTCATCGTCATCAGACCTCTTCCTC                                                                         <  2:1743892/101‑1 (MQ=255)
                                                                                                                                                                                                               
CCAGCCCGTAGCTGGCGCCCTGCGCCAAAAGCGCGCCGATCGGGCCCAGCACCACCAGCGACAGCATCGTCAGCGTGATCCCCATCGAGAGCCCCAGCCCCGGCATC....................................................................................................  >  NC_014034/2725593‑2725699
....................................................................................................CGGCATCCAGCGTCATCGTCATCAGACCTCTTCCTCTTCGAAATCGGCGGTGAAATCGGGTTTTTCCCAGGTGCCCAGAACCTTGCGCAGGAAGGGCGGCGGGGTGC  >  NC_014034/3473103‑3473202

Base quality scores:  ATCG  < 3 ≤  ATCG  < 7 ≤  ATCG  < 17 ≤  ATCG  < 25 ≤  ATCG  < 37 ≤  ATCG