New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 2771264 =227 (1.070)2 (0.010) 2/200 32.8 0.01 coding (269/2412 nt) lon ATP‑dependent protease La
?NC_014034 3130138 = 272 (1.280)coding (1021/1257 nt) RCAP_rcc02936 hypothetical protein
Rejected: Position hash score below cutoff.

CGGCCTGCGCCTCGAAGAAGCGGTCGTTTTCGACGAAATCGGTGATCCGCACCCGGCTTTTGCCCT...........................................................  <  NC_014034/2771329‑2771264
..................................................................GAGCGCGAAAAGGAAAAGAGCCGGGATATTGATGGCGGGCCGAATTATTATATCGTGCG  >  NC_014034/3130138‑3130196
                                                                                                                             
CGGCCTGCGCCTCGAAGAAGCGGTCGTTTTCGACGAAATCGGTGATCCGCACCCGGCTTTTGCCCTGAGCGCGAAAAGGAAAAGAGCCGGGATATTGATGG                          >  2:1570233/1‑101 (MQ=255)
                        CGTTTTCGACGAAATCGGTGATCCGCACCCGGCTTTTGCCCTGAGCGCGAAAAGGAAAAGAGCCGGGATATTGATGGCGGGCCGAATTATTATATCGTGCG  <  1:1570342/101‑1 (MQ=255)
                                                                                                                             
CGGCCTGCGCCTCGAAGAAGCGGTCGTTTTCGACGAAATCGGTGATCCGCACCCGGCTTTTGCCCT...........................................................  <  NC_014034/2771329‑2771264
..................................................................GAGCGCGAAAAGGAAAAGAGCCGGGATATTGATGGCGGGCCGAATTATTATATCGTGCG  >  NC_014034/3130138‑3130196

Base quality scores:  ATCG  < 3 ≤  ATCG  < 33 ≤  ATCG  < 34 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG