New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 2871886 =208 (1.090)2 (0.010) 2/180 31.1 0.01 coding (857/1407 nt) mdtK multidrug resistance protein MdtK
?NC_014034 = 3024573 214 (1.010)coding (18/702 nt) chvI transcriptional regulator ChvI
Rejected: Position hash score below cutoff.

GCCTGCCCGCCGGGCTGACGCATCTGTCCGAGGCCGGGCTGTTTCAGGCCTCGGCGCTGATGATGGGCTGGCTGGGCACGGTGCAGCTGGCGGCGCATGGGATCGCGCT....................................................................................................  <  NC_014034/2871994‑2871886
...................................................................................................GGATCGCGCTGGTCGACGACGATCGCAACATTCTGACGTCGGTCTCGATGACGCTTGAGGCCGAGGGCTACGAGGTCGAGACCTACAACGACGGTCAGGCCGCGCTCGAC  <  NC_014034/3024573‑3024474
                                                                                                                                                                                                                 
                                GCCGGGCTGTTTCAGGCCTCGGCGCTGATGATGGGCTGGCTGGGCACGGTGCAGCTGGCGGCGCATGGGATCGCGCTGGTCGACGACGATCGCAACATTCT                                                                              >  2:478326/1‑101 (MQ=255)
                                 CCGGGCTGTTTCAGGCCTCGGCGCTGATGATGGGCTGGCTGGGCACGGTGCAGCTGGCGGCGCATGGGATCGCGCTGGTCGACGACGATCGCAACATTCTG                                                                             <  1:478383/101‑1 (MQ=255)
                                                                                                                                                                                                                 
GCCTGCCCGCCGGGCTGACGCATCTGTCCGAGGCCGGGCTGTTTCAGGCCTCGGCGCTGATGATGGGCTGGCTGGGCACGGTGCAGCTGGCGGCGCATGGGATCGCGCT....................................................................................................  <  NC_014034/2871994‑2871886
...................................................................................................GGATCGCGCTGGTCGACGACGATCGCAACATTCTGACGTCGGTCTCGATGACGCTTGAGGCCGAGGGCTACGAGGTCGAGACCTACAACGACGGTCAGGCCGCGCTCGAC  <  NC_014034/3024573‑3024474

Base quality scores:  ATCG  < 3 ≤  ATCG  < 27 ≤  ATCG  < 31 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG