New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 28805790 (0.000)75 (0.400) 2/176 30.8 1.00 coding (1006/1053 nt) pdxA 4‑hydroxythreonine‑4‑phosphate dehydrogenase
?NC_014034 2880580 = 0 (0.000)coding (1005/1053 nt) pdxA 4‑hydroxythreonine‑4‑phosphate dehydrogenase
Rejected: Position hash score below cutoff.

CGCGCAAGGGCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCG............................................................................................................  >  NC_014034/2880480‑2880579
..............................................................................................................G.CC.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGCTGGCCTTGCCGGTGCCCGCAATGTCATAGGCCGTGCCATG  >  NC_014034/2880580‑2880675
                                                                                                    ||||||||||                                                                                                  
CGCGCAAGGGCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGG                                                                                                             >  1:4234234/1‑101 (MQ=33)
CGCGCAAGGGCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGG                                                                                                             >  2:863297/1‑101 (MQ=33)
 GCGCAAGGGCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGC                                                                                                            >  2:2608475/1‑101 (MQ=32)
  CGCAAGGGCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCG                                                                                                           >  2:2793093/1‑101 (MQ=32)
  CGCAAGGGCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCG                                                                                                           >  2:865639/1‑101 (MQ=32)
  CGCAAGGGCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCG                                                                                                           >  1:1394461/1‑101 (MQ=32)
     AAGGGCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGg                                                                                                        >  2:2860165/1‑100 (MQ=17)
     AAGGGCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGT                                                                                                        >  2:4033388/1‑101 (MQ=32)
         GCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGGCACA                                                                                                    >  1:4144279/1‑101 (MQ=17)
             CAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAG.CCg                                                                                               >  2:452169/1‑100 (MQ=14)
                  CGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAG.CCGCGCCG                                                                                          >  1:4233870/1‑101 (MQ=17)
                    TCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAG.CCGCGCCGCC                                                                                        >  2:3876246/1‑101 (MQ=17)
                      AATCGCAACCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGCCC.CGCCGCCCC                                                                                      >  2:3564714/1‑101 (MQ=0)
                       ATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAG.CCGCGCCGCCCCC                                                                                     >  1:1787068/1‑101 (MQ=17)
                       ATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGGCACAG.CCGCGCCGCCCCC                                                                                     >  2:4502/1‑101 (MQ=12)
                        TCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCA                                                                                    <  2:2347404/101‑1 (MQ=17)
                          GCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATC                                                                                  >  2:2537350/1‑101 (MQ=17)
                             GCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTC                                                                               >  1:2450095/1‑101 (MQ=17)
                              CCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCG                                                                              >  1:556641/1‑101 (MQ=17)
                               CAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGC                                                                             >  2:1234502/1‑101 (MQ=17)
                                AAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCC                                                                            >  1:1877819/1‑101 (MQ=17)
                                AAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCC                                                                            >  2:499987/1‑101 (MQ=17)
                                 AAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCG                                                                           >  2:2227649/1‑101 (MQ=17)
                                    CCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCA                                                                        >  1:1400350/1‑101 (MQ=17)
                                    CCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCA                                                                        >  2:4040382/1‑101 (MQ=17)
                                     CCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCAT                                                                       >  2:2354384/1‑101 (MQ=17)
                                       GTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCG                                                                     >  1:681042/1‑101 (MQ=17)
                                        TCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGT                                                                    >  2:1087521/1‑101 (MQ=17)
                                         CCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGGGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTC                                                                   >  1:1027472/1‑101 (MQ=12)
                                         CCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTC                                                                   >  2:2225/1‑101 (MQ=17)
                                          CCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCA                                                                  >  2:3745368/1‑101 (MQ=17)
                                           CCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCGCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAA                                                                 >  2:3454553/1‑101 (MQ=12)
                                             TTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGG                                                               >  1:2691147/1‑101 (MQ=17)
                                                CTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCG                                                            <  1:1907498/101‑1 (MQ=17)
                                                 TTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGC                                                           >  2:3435108/1‑101 (MQ=17)
                                                   TTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGA                                                         >  2:1881732/1‑101 (MQ=17)
                                                   TTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGA                                                         >  1:3976822/1‑101 (MQ=17)
                                                        CTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGA                                                    >  2:4056388/1‑101 (MQ=17)
                                                            CTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGg                                                >  2:1522827/1‑100 (MQ=14)
                                                            CTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGT                                                >  2:1285584/1‑101 (MQ=14)
                                                                AAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGG                                            >  2:2697784/1‑101 (MQ=1)
                                                                AAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGG                                            >  2:231165/1‑101 (MQ=1)
                                                                AAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGG                                            >  1:1396561/1‑101 (MQ=1)
                                                                 AATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGG                                           >  1:3072557/1‑101 (MQ=1)
                                                                 AATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGG                                           >  1:2563696/1‑101 (MQ=1)
                                                                  ATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGC                                          >  2:2596713/1‑101 (MQ=1)
                                                                    ATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGCTG                                        >  2:2560029/1‑101 (MQ=1)
                                                                    ATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGCTG                                        >  2:447968/1‑101 (MQ=1)
                                                                     TCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGCTGG                                       >  2:1896317/1‑101 (MQ=1)
                                                                      CCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGCTGGC                                      >  2:160053/1‑101 (MQ=1)
                                                                        CGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGCTGGCCT                                    >  2:2557606/1‑101 (MQ=1)
                                                                         ggaGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGCTGGCCTT                                   >  1:1945535/4‑101 (MQ=2)
                                                                         GGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGCTGGCCTT                                   >  1:1945534/1‑101 (MQ=11)
                                                                            GGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGCTGGCCTTGCC                                >  2:1918195/1‑101 (MQ=1)
                                                                             GTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCCTCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGCTGGCCTTGCCG                               >  1:3561587/1‑101 (MQ=0)
                                                                              TCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGCTGGCCTTGCCGG                              >  1:3313189/1‑101 (MQ=1)
                                                                              TCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGCTGGCCTTGCCGG                              >  1:3098586/1‑101 (MQ=1)
                                                                               CCGGGGGCAGAGCCCCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGGGCGGGCTGGCCTTGCCGGT                             >  2:2340887/1‑101 (MQ=0)
                                                                               CCGGGGGCAGAGCCCCCGGCGGCGCGTCACAG.CCGCGCCACCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGCTGGCCTTGCCGGg                             >  1:1482857/1‑100 (MQ=0)
                                                                                CGGGGGCAGAGCCCCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGCTGGCCTTGCCGGTG                            >  1:3773695/1‑101 (MQ=1)
                                                                                CGGGGGCAGAGCCCCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGCTGGCCTTGCCGGTG                            >  2:3153448/1‑101 (MQ=1)
                                                                                CGGGGGCAGAGCCCCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGCTGGCCTTGCCGGTG                            >  2:1359403/1‑101 (MQ=1)
                                                                                CGGGGGCAGAGCCCCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGCTGGCCTTGCCGGTG                            >  2:1291168/1‑101 (MQ=1)
                                                                                  GGGGCGGAGCCCCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGCTGGCCTTGCCGGTGCC                          <  1:1896437/101‑1 (MQ=35)
                                                                                   GGGCAGAGCCCCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGCTGGCCTTGCCGGTGCCC                         >  1:4051166/1‑101 (MQ=11)
                                                                                   GGGCAGACCCCCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGCTGGCCTTGCCGGTGCCC                         <  2:3960365/101‑1 (MQ=0)
                                                                                     GCAGAGCCCCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGCTGGCCTTGCCCGTGCCCGC                       >  2:2898650/1‑101 (MQ=0)
                                                                                        GAGCCCCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGCTGGCCTTGCCGGTGCCCGCAAT                    <  2:4034034/101‑1 (MQ=32)
                                                                                        GAGCCCCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGCTGGCCTTGCCGGTGCCCGCAAT                    >  2:4159633/1‑101 (MQ=32)
                                                                                         ccCCCCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGCTGGCCTTGCCGGTGCCCGCAATG                   <  1:4040643/99‑1 (MQ=17)
                                                                                         AGCCCCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGCTGGCCTTGCCGGTGCCCGCAATG                   >  1:2641137/1‑101 (MQ=32)
                                                                                           CCCCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGCTGGCCTTGCCGGTGCCCGCAATGTC                 <  1:2741449/101‑1 (MQ=32)
                                                                                            gccgcGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGCTGGCCTTGCCGGTGCCCGCAATGTCA                <  1:3564967/96‑1 (MQ=17)
                                                                                            CCCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGCTGGCCTTGCCGGTGCCCGCAATGTCA                <  1:1918321/101‑1 (MQ=32)
                                                                                            CCCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGCTGGCCTTGCCGGCGCCCGCAATGTCA                >  1:3638779/1‑101 (MQ=17)
                                                                                             CCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGCTGGCCTTGCCGGTGCCCGCAATGTCAT               >  2:2911757/1‑101 (MQ=32)
                                                                                             CCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGCTGGCCTTGCCGGTGCCCGCAATGTCAT               >  1:2449335/1‑101 (MQ=32)
                                                                                             CCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGCTGGCCTTGCCGGTGCCCGCAATGTCAT               <  2:680965/101‑1 (MQ=32)
                                                                                             CCCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGCTGGCCTTGCCGGTGCCCGCAATGTCAT               >  1:453907/1‑101 (MQ=32)
                                                                                              cggcCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGCTGGCCTTGCCGGTGCCCGCAATGTCATA              <  1:782921/97‑1 (MQ=17)
                                                                                              CCGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGCTGGCCTTGCCGGTGCCCGCAATGTCATA              >  2:3479801/1‑101 (MQ=32)
                                                                                               CGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGCTGGCCTTGCCGGTGCCCGCAATGTCATAG             <  1:1359503/101‑1 (MQ=32)
                                                                                               CGGCGGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGCTGGCCTTGCCGGTGCCCGCAATGTCATAG             >  1:2881401/1‑101 (MQ=32)
                                                                                                   GGCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGCTGGCCTTGCCGGTGCCCGCAATGTCATAGGCCG         <  2:744996/101‑1 (MQ=32)
                                                                                                    GCGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGCTGGCCTTGCCGGTGCCCGCAATGTCATAGGCCGT        >  1:3229674/1‑101 (MQ=32)
                                                                                                     CGCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGCTGGCCTTGCCGGTGCCCGCAATGTCATAGGCCGTG       <  2:1396462/101‑1 (MQ=31)
                                                                                                      GCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGCTGGCCTTGCCGGTGCCCGCAATGTCATAGGCCGTGC      <  2:2659205/101‑1 (MQ=11)
                                                                                                      GCGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGCTGGCCTTGCCGGTGCCCGCAATGTCATAGGCCGTGC      <  1:2560220/101‑1 (MQ=11)
                                                                                                       CGTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGGTGGCCTTGCCGGTGCCCGCAATGTCATAGGCCGTGCC     >  1:3614401/1‑101 (MQ=1)
                                                                                                        GTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGCTGGCCTTGCCGGTGCCCGCAATGTCATAGGCCGTGCCA    >  2:3079274/1‑101 (MQ=1)
                                                                                                        GTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGCTGGCCTTGCCGGTGCCCGCAATGTCATAGGCCGTGCCA    <  1:168847/101‑1 (MQ=1)
                                                                                                        GTCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGCTGGCCTTGCCGGTGCCCGCAATGTCATAGGCCGTGCCA    >  1:2509069/1‑101 (MQ=1)
                                                                                                         TCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGCTGGCCTTGCCGGTGCCCGCAATGTCATAGGCCGTGCCAT   <  2:3357168/101‑1 (MQ=1)
                                                                                                         TCACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGCTGGCCTTGCCGGTGCCCGCAATGTCATAGGCCGTGCCAT   >  2:2175488/1‑101 (MQ=1)
                                                                                                          CACAG.CCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGCTGGCCTTGCCGGTGCCCGCAATGTCATAGGCCGTGCCATG  <  2:4144017/101‑1 (MQ=1)
                                                                                                    ||||||||||                                                                                                  
CGCGCAAGGGCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCG............................................................................................................  >  NC_014034/2880480‑2880579
..............................................................................................................G.CC.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGCTGGCCTTGCCGGTGCCCGCAATGTCATAGGCCGTGCCATG  >  NC_014034/2880580‑2880675

Base quality scores:  ATCG  < 3 ≤  ATCG  < 19 ≤  ATCG  < 26 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG