| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_014034 | = 2925326 | 233 (1.220) | 3 (0.020) | 2/180 | 31.1 | 0.01 | intergenic (+110/‑325) | RCAP_rcc02735/RCAP_rcc02736 | virulence‑associated protein E/hypothetical protein |
| ? | NC_014034 | 2925479 = | 248 (1.170) | intergenic (+263/‑172) | RCAP_rcc02735/RCAP_rcc02736 | virulence‑associated protein E/hypothetical protein | |||||
| Rejected: Position hash score below cutoff. | |||||||||||
AGGTAGCTGCAACATGTCCAGCATCGAGAGGGCACCCGTTCGGGTGCCCTTTTGCGTCTTGGCCTTGTCCCACTTCGGGCCTTGTCCCACTTCAAGCCCAAGGTGGGACA................................................................................................... > NC_014034/2925217‑2925326
....................................................................................................AGGTGGGACAAGCATTGTTCTGAAAGGAAAATTTGACGTCCCACTTGAGCGGTGAATGGGACAGCCCAAAGCGAGGTGGGACATGGATGCGGTCGGGAGCATTTTCCTT > NC_014034/2925479‑2925577
CGTTCGGGTGCCCTTTTGCGTCTTGGCCTTGTCCCACTTCGGGCCTTGTCCCACTTCAAGCCCAAGGTGGGACAAGCATTGTTCTGAAAGGAAAATTTGAC < 1:2849409/101‑1 (MQ=255)
TTGGCCTTGTCCCACTTCGGGCCTTGTCCCACTTCAAGCCCAAGGTGGGACAAGCATTGTTCTGAAAGGAAAATTTGACGTCCCACTTGAGCGGTGAAgtg < 2:3939844/101‑4 (MQ=255)
GGCCTTGTCCCACTTCGGGCCTTGTCCCACTTCAAGCCCAAGGTGGGACAAGCATTGTTCTGAAAGGAAAATTTGACGTCCCACTTGAGCGGTGAAgtggg > 2:2803488/1‑96 (MQ=255)
AGGTAGCTGCAACATGTCCAGCATCGAGAGGGCACCCGTTCGGGTGCCCTTTTGCGTCTTGGCCTTGTCCCACTTCGGGCCTTGTCCCACTTCAAGCCCAAGGTGGGACA................................................................................................... > NC_014034/2925217‑2925326
....................................................................................................AGGTGGGACAAGCATTGTTCTGAAAGGAAAATTTGACGTCCCACTTGAGCGGTGAATGGGACAGCCCAAAGCGAGGTGGGACATGGATGCGGTCGGGAGCATTTTCCTT > NC_014034/2925479‑2925577
Base quality scores:
ATCG
< 3 ≤
ATCG
< 31 ≤
ATCG
< 33 ≤
ATCG
< 35 ≤
ATCG
< 41 ≤
ATCG
|