New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	2937251 =	210 (1.100)	2 (0.010)	2/180	31.1	0.01	coding (1839/3084 nt)	RCAP_rcc02747	acriflavin resistance protein family
	?	NC_014034	3542140 =	219 (1.030)					coding (724/912 nt)	prpB	methylisocitrate lyase
Rejected: Position hash score below cutoff.

TCAGCTTCGAGAACACATCGACCCCGGGCAGGGTCGCCGCATGATCCGCCAGGGCCCGGCGCAGGGCGTTGCGTTCCTCCAGCCCCTTGGTCATCACCACGATCTGGCCG....................................................................................................  <  NC_014034/2937360‑2937251 ....................................................................................................GATCTGGCCGGTGTCCTCCCTGCGGGTGGCGAACCGCGCGCAGGAACGGCTTTACGCCGCGCTTGCCCGCGACGGCGCCACCACCGCGCTTCTGCCCGAGATGCAGACCC  >  NC_014034/3542140‑3542239                                                                                                                                                                                                                                                                                            tcTCCTCCAGCCCCTTGGTCATCACCACGATCTGGCCGGTGTCCTCCCTGCGGGTGGCGAACCGCGCGCAGGAACGGCTTTACGCCGCGCTTGCCCGCGAC                                       <  1:814117/99‑1 (MQ=255)                                                                            CCTCCAGCCCCTTGGTCATCACCACGATCTGGCCGGTGTCCTCCCTGCGGGTGGCGAACCGCGCGCAGGAACGGCTTTACGCCGCGCTTGCCCGCGACaga                                    >  2:814036/1‑98 (MQ=255)                                                                                                                                                                                                                    TCAGCTTCGAGAACACATCGACCCCGGGCAGGGTCGCCGCATGATCCGCCAGGGCCCGGCGCAGGGCGTTGCGTTCCTCCAGCCCCTTGGTCATCACCACGATCTGGCCG....................................................................................................  <  NC_014034/2937360‑2937251 ....................................................................................................GATCTGGCCGGTGTCCTCCCTGCGGGTGGCGAACCGCGCGCAGGAACGGCTTTACGCCGCGCTTGCCCGCGACGGCGCCACCACCGCGCTTCTGCCCGAGATGCAGACCC  >  NC_014034/3542140‑3542239 Base quality scores:  ATCG  < 3 ≤  ATCG  < 30 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG