New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 3034520 =204 (0.980)2 (0.010) 2/196 32.5 0.01 coding (592/2472 nt) torA trimethylamine‑N‑oxide reductase
?NC_014034 3035160 = 209 (0.990)coding (578/630 nt) torD chaperone protein TorD
Rejected: Position hash score below cutoff.

TGCACAATTGCACCACGCTTCTGCGCCGGATGCTGACGCTGGCGGGCGGCTATGTGAACGGCGCGGGCGATTATTCGACCGGCGCGGCGCAGGTGATCATGC....................................................................................................  <  NC_014034/3034621‑3034520
....................................................................................................GCGCCGCCAGGAGCAGCGCCGCAGCCCCGGCAAAGAAGCCGGTGCGATCCTCGGCCCGGACCGCGGCGCAAAAGCCGGGCAGCCAGAGCCGCAGCCGGTCGC  >  NC_014034/3035160‑3035259
                                                                                                                                                                                                          
                                                        AACGGCGCGGGCGATTATTCGACCGGCGCGGCGCAGGTGATCATGCGCCGCCAGGAGCAGCGCCGCAGCCCCGGCAAAGAAGCCGGTGCGATCCTCGGCCC                                               >  1:2938199/1‑101 (MQ=255)
                                                                  GCGATTATTCGACCGGCGCGGCGCAGGTGATCATGCGCCGCCAGGAGCAGCGCCGCAGCCCCGGCAAAGAAGCCGGTGCGATCCTCGGCCCGGACCGCGGC                                     <  2:2937977/101‑1 (MQ=255)
                                                                                                                                                                                                          
TGCACAATTGCACCACGCTTCTGCGCCGGATGCTGACGCTGGCGGGCGGCTATGTGAACGGCGCGGGCGATTATTCGACCGGCGCGGCGCAGGTGATCATGC....................................................................................................  <  NC_014034/3034621‑3034520
....................................................................................................GCGCCGCCAGGAGCAGCGCCGCAGCCCCGGCAAAGAAGCCGGTGCGATCCTCGGCCCGGACCGCGGCGCAAAAGCCGGGCAGCCAGAGCCGCAGCCGGTCGC  >  NC_014034/3035160‑3035259

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 39 ≤  ATCG