New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 309899208 (1.060)2 (0.010) 2/186 31.7 0.01 coding (1625/1761 nt) RCAP_rcc00272 heparinase II/III family protein
?NC_014034 409179 = 186 (0.880)coding (224/873 nt) dapA dihydrodipicolinate synthase
Rejected: Position hash score below cutoff.

GCCCTGATTGGCGCCGGGGGTATCCTGAGCCTTGGCCAAGGTCCAGCCGATTTGCTGGATCGGCGCCTGCAAACGCCCCGAAAGCACGATTTGTTGCGTGGCCCGCG....................................................................................................  >  NC_014034/309793‑309899
....................................................................................................GCCCGCGCCCGCGATCACCGGCACGCGTTTCGCCGCGGTTTCCACCACGACGCGCACGACTTCGTTATGTTCTTCATGGCTCAGCGTCGGGCTTTCGCCCGTCGTGC  >  NC_014034/409179‑409278
                                                                                                                                                                                                               
                                  atctAGGTCCAGCCGATTTGCTGGATCGGCGCCTGCAAACGCCCCGAAAGCACGATTTGTTGCGTGGCCCGCGCCCGCGATCACCGGCACGCGTTTCGCCG                                                                          <  1:955611/97‑1 (MQ=255)
                                      AGGTCCAGCCGATTTGCTGGATCGGCGCCTGCAAACGCCCCGAAAGCACGATTTGTTGCGTGGCCCGCGCCCGCGATCACCGGCACGCGTTTCGCCGagat                                                                      >  2:955526/1‑97 (MQ=255)
                                                                                                                                                                                                               
GCCCTGATTGGCGCCGGGGGTATCCTGAGCCTTGGCCAAGGTCCAGCCGATTTGCTGGATCGGCGCCTGCAAACGCCCCGAAAGCACGATTTGTTGCGTGGCCCGCG....................................................................................................  >  NC_014034/309793‑309899
....................................................................................................GCCCGCGCCCGCGATCACCGGCACGCGTTTCGCCGCGGTTTCCACCACGACGCGCACGACTTCGTTATGTTCTTCATGGCTCAGCGTCGGGCTTTCGCCCGTCGTGC  >  NC_014034/409179‑409278

Base quality scores:  ATCG  < 3 ≤  ATCG  < 31 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG