New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 3138572 =181 (0.920)2 (0.010) 2/186 31.7 0.01 coding (54/648 nt) RCAP_rcc02949 hypothetical protein
?NC_014034 = 3647446 202 (0.950)coding (805/873 nt) serB phosphoserine phosphatase SerB
Rejected: Position hash score below cutoff.

GCGCTGGCTGAATACGCCGCAGCGCAACTATCGCATAAATGGTGAGGCGAACGATGGAACCGACCAAGAATCTCCCCACAAATCTGGAAACGGGGCGCAACGAGATC....................................................................................................  <  NC_014034/3138678‑3138572
....................................................................................................CGAGATCCGGATCAACCACGGCGATCTTTCGGCGCTGCTGTACATTCAGGGCTATGCGGTGGGCGATTTCGCCTGAAGCTTCCCGCCCTGCCAGACCCGGGTCAGTG  <  NC_014034/3647446‑3647347
                                                                                                                                                                                                               
                                                                atctAATCTCCCCACAAATCTGGAAACGGGGCGCAACGAGATCCGGATCAACCACGGCGATCTTTCGGCGCTGCTGTACATTCAGGGCTATGCGGTGGGCG                                            <  1:820017/97‑1 (MQ=255)
                                                                    AATCTCCCCACAAATCTGGAAACGGGGCGCAACGAGATCCGGATCAACCACGGCGATCTTTCGGCGCTGCTGTACATTCAGGGCTATGCGGTGGGCGAgat                                        >  2:819936/1‑98 (MQ=255)
                                                                                                                                                                                                               
GCGCTGGCTGAATACGCCGCAGCGCAACTATCGCATAAATGGTGAGGCGAACGATGGAACCGACCAAGAATCTCCCCACAAATCTGGAAACGGGGCGCAACGAGATC....................................................................................................  <  NC_014034/3138678‑3138572
....................................................................................................CGAGATCCGGATCAACCACGGCGATCTTTCGGCGCTGCTGTACATTCAGGGCTATGCGGTGGGCGATTTCGCCTGAAGCTTCCCGCCCTGCCAGACCCGGGTCAGTG  <  NC_014034/3647446‑3647347

Base quality scores:  ATCG  < 3 ≤  ATCG  < 32 ≤  ATCG  < 34 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG