New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 3342727179 (0.920)2 (0.010) 2/184 31.5 0.01 coding (300/540 nt) RCAP_rcc03145 AsnC/Lrp family transcriptional regulator
?NC_014034 = 3342743 175 (0.830)coding (284/540 nt) RCAP_rcc03145 AsnC/Lrp family transcriptional regulator
Rejected: Position hash score below cutoff.

CCCTCAAGGCGGCGGATCGACAGGATCGTCTCGTCCAGCTCTTCCAGCGAGCGGGCGCCGATTTCCGCGATCAGATCCCACTGCCCGTTCGTCGTATGCACCGCCTGC....................................................................................................  >  NC_014034/3342620‑3342727
....................................................................................................CCGCCTGCTCGGCCTGCCGCCGGTGCAGGCGGTGCATACGACGAACGGGCAGTGGGATCTGATCGCGGAAATCGGCGCCCGCTCGCTGGAAGAGCTGGACGAGACGAT  <  NC_014034/3342743‑3342644
                                                                                                                                                                                                                
                              atcTCCAGCTCTTCCAGCGAGCGGGCGCCGATTTCCGCGATCAGATCCCACTGCCCGTTCGTCGTATGCACCGCCTGCTCGGCCTGCCGACGGTGCAGGCG                                                                               <  2:3932565/98‑1 (MQ=255)
                                  CCAGCTCTTCCAGCGAGCGGGCGCCGATTTCCGCGATCAGATCCCACTGCCCGTTCGTCGTATGCACCGCCTGCTCGGCCTGCCGACGGTGCAGGCGagat                                                                           >  1:3932825/1‑97 (MQ=255)
                                                                                                                                                                                                                
CCCTCAAGGCGGCGGATCGACAGGATCGTCTCGTCCAGCTCTTCCAGCGAGCGGGCGCCGATTTCCGCGATCAGATCCCACTGCCCGTTCGTCGTATGCACCGCCTGC....................................................................................................  >  NC_014034/3342620‑3342727
....................................................................................................CCGCCTGCTCGGCCTGCCGCCGGTGCAGGCGGTGCATACGACGAACGGGCAGTGGGATCTGATCGCGGAAATCGGCGCCCGCTCGCTGGAAGAGCTGGACGAGACGAT  <  NC_014034/3342743‑3342644

Base quality scores:  ATCG  < 3 ≤  ATCG  < 30 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG