New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	3350995 =	258 (1.340)	2 (0.010)	2/182	24.9	0.01	coding (423/750 nt)	RCAP_rcc03152	hypothetical protein
	?	NC_014035	= 100628	141 (1.000)					coding (952/1104 nt)	repC	plasmid replication protein RepC
Rejected: Position hash score below cutoff.

ATTCTTAATTTGCGCCTCGATAGCTGAATTTATAGCATCGATGACGCCGGATAATAGTTTTAAATTCGGGTCAAGAGTTTTATCTGATCAGGAGTGGTCTGCGCGCTTG....................................................................................................  <  NC_014034/3351103‑3350995 ....................................................................................................GCGCGCTTGGCACGGCGCCGATGCTGCGCACGGCCTGACCATAGGTGGCCTGATCGATGCCGATCATCGGCGCCAGCCTCTGCGCATGAGAGACCACATCGGCAAAGCT  <  NC_014035/100628‑100529                                                                                                                                                                                                                                                        TCGATGACGCCGGATAATAGTTTTAAATTCGGGTCAAGAGTTTTATCTGATCAGGAGTGGTCTGCGCGCTTGGCACGGCGCCGATGCTGCGCACGGCCTGA                                                                         >  1:2439964/1‑101 (MQ=255)                                                                   CGGGTCAAGAGTTTTATCTGATCAGGAGTGGTCTGCGCGCTTGGCACGGCGCCGATGCTGCGCACGGCCTGACCATAGGTGGCCTGATCGATGCCGATCAT                                            <  2:2439780/101‑1 (MQ=255)                                                                                                                                                                                                                   ATTCTTAATTTGCGCCTCGATAGCTGAATTTATAGCATCGATGACGCCGGATAATAGTTTTAAATTCGGGTCAAGAGTTTTATCTGATCAGGAGTGGTCTGCGCGCTTG....................................................................................................  <  NC_014034/3351103‑3350995 ....................................................................................................GCGCGCTTGGCACGGCGCCGATGCTGCGCACGGCCTGACCATAGGTGGCCTGATCGATGCCGATCATCGGCGCCAGCCTCTGCGCATGAGAGACCACATCGGCAAAGCT  <  NC_014035/100628‑100529 Base quality scores:  ATCG  < 3 ≤  ATCG  < 34 ≤  ATCG  < 35 ≤  ATCG  < 36 ≤  ATCG  < 41 ≤  ATCG