New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 3414148176 (0.920)2 (0.010) 2/180 31.1 0.01 coding (1909/2184 nt) priA primosomal protein N`
?NC_014034 = 3469475 168 (0.790)coding (785/1161 nt) nifS cysteine desulfurase
Rejected: Position hash score below cutoff.

CGAACATCCGGTGATCCGCGCCATTCTTGGCGGTGACGAGGAGGCGTTCTGGAAGGCCGAGGCCGAGGGGCGCCGGGCGGCGAACGTGCCGCCCTTTGGCCGGATGGCGG....................................................................................................  >  NC_014034/3414039‑3414148
....................................................................................................CGGATGGCGGCCGATCTTTCGCGCATCGCGACGCTGCGCGACTGGCTGGAATCCGGAATCCTGGCCTTGGGCGGCTGTCAGCGGCTGGGCGATCCCGCCAACCGGCTGGC  <  NC_014034/3469475‑3469376
                                                                                                                                                                                                                  
                                                                GAGGGGCGCCGGGCGGCGAACGTGCCGCCCTTTGGCCGGATGGCGGCCGATCTTTCGCGCATCGCGACGCTGCGCGACTGGCTGGAATCCGGGATCCTGGC                                               >  2:53002/1‑101 (MQ=255)
                                                                             CGGCGAACGTGCCGCCCTTTGGCCGGATGGCGGCCGATCTTTCGCGCATCGCGACGCTGCGCGACTGGCTGGAATCCGGAATCCTGGCCTTGGGCGGCTGT                                  <  1:53017/101‑1 (MQ=255)
                                                                                                                                                                                                                  
CGAACATCCGGTGATCCGCGCCATTCTTGGCGGTGACGAGGAGGCGTTCTGGAAGGCCGAGGCCGAGGGGCGCCGGGCGGCGAACGTGCCGCCCTTTGGCCGGATGGCGG....................................................................................................  >  NC_014034/3414039‑3414148
....................................................................................................CGGATGGCGGCCGATCTTTCGCGCATCGCGACGCTGCGCGACTGGCTGGAATCCGGAATCCTGGCCTTGGGCGGCTGTCAGCGGCTGGGCGATCCCGCCAACCGGCTGGC  <  NC_014034/3469475‑3469376

Base quality scores:  ATCG  < 3 ≤  ATCG  < 15 ≤  ATCG  < 24 ≤  ATCG  < 32 ≤  ATCG  < 39 ≤  ATCG