New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 3433575 =189 (0.950)2 (0.010) 2/188 31.8 0.01 coding (344/1104 nt) RCAP_rcc03234 monosacharide ABC transporter permease
?NC_014034 3498802 = 188 (0.890)coding (234/1140 nt) dapE succinyl‑diaminopimelate desuccinylase
Rejected: Position hash score below cutoff.

ATATAGTTGAACATGATCGTGGTGATGACGATATGGCTGCCGCGTTTCGCCTGCAGCCAGGCCGGAATCGCCGCCCAGGCCGCGCCGAAAGCCGCCGCGCCCAGGC...................................................................................................  <  NC_014034/3433680‑3433575
....................................................................................................CCAGGCGGCCGCATCGCCCACCGGCACGACATCGGTGTGACCGTTGAAACCGAAGGTCTTCGCCCCCTTCGCCCCCCAGCGCGCGAAAAGATTGGGCGTGCCGTT  >  NC_014034/3498802‑3498900
                                                                                                                                                                                                             
                                                                    CGCCGCCCAGGCCGCGCCGAAAGCCGCCGCGCCCAGGCGGCCGCATCGCCCACCGGCACGACATCGGTGTGACCGTTGAAACCGAAGGTCTTCGCCCCCTT                                      <  1:4035818/101‑1 (MQ=255)
                                                                    CGCCGCCCAGGCCGCGCCGAAAGCCGCCGCGCCCAGGCGGCCGCATCGCCCACCGGCACGACATCGGTGTGACCGTTGAAACCGAAGGTCTTCGCCCCCTT                                      >  2:4035557/1‑101 (MQ=255)
                                                                                                                                                                                                             
ATATAGTTGAACATGATCGTGGTGATGACGATATGGCTGCCGCGTTTCGCCTGCAGCCAGGCCGGAATCGCCGCCCAGGCCGCGCCGAAAGCCGCCGCGCCCAGGC...................................................................................................  <  NC_014034/3433680‑3433575
....................................................................................................CCAGGCGGCCGCATCGCCCACCGGCACGACATCGGTGTGACCGTTGAAACCGAAGGTCTTCGCCCCCTTCGCCCCCCAGCGCGCGAAAAGATTGGGCGTGCCGTT  >  NC_014034/3498802‑3498900

Base quality scores:  ATCG  < 3 ≤  ATCG  < 31 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG