New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 3461383	90 (0.420)	15 (0.070)	2/200	32.8	0.14	intergenic (‑93/+37)	RCAP_rcc03260/RCAP_rcc03261	NAD‑dependent epimerase/dehydratase/TOBE domain‑containing protein
	?	NC_014034	3461387 =	90 (0.420)					intergenic (‑97/+33)	RCAP_rcc03260/RCAP_rcc03261	NAD‑dependent epimerase/dehydratase/TOBE domain‑containing protein
Rejected: Position hash score below cutoff.

TTCATCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAAGGGGG.GCAGCCG....................................................................................................  >  NC_014034/3461286‑3461383 ...................................................................................................CCACCGGGCCGC.CCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCTTGATGATCGCGCAGGCCTCGTCGCCGACCTTCAG  >  NC_014034/3461387‑3461485                                                                                                                                                                                                         TTCATCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAAGGGGGCGCAGCCACC                                                                                                    <  1:1885369/101‑1 (MQ=255) TTCATCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAAGGGGGCGCAGCCACC                                                                                                    >  1:3818809/1‑101 (MQ=255) TTCATCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAAGGGGGCGCAGCCACC                                                                                                    <  2:2022379/101‑1 (MQ=255)  TCATCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAAGGGGGCGCAGCCACCc                                                                                                   <  2:2534213/101‑2 (MQ=255)  TCATCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAAGGGGGCGCAGCCACCc                                                                                                   <  2:4018786/101‑2 (MQ=255)  TCATCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAAGGGGGCGCAGCCACCc                                                                                                   <  2:628450/101‑2 (MQ=255)   CATCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAAGGGGGCGCAGCCACCcg                                                                                                  >  1:1645209/1‑99 (MQ=255)   CATCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAAGGGGGCGCAGCCACCcg                                                                                                  >  1:2214587/1‑99 (MQ=255)   CATCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAAGGGGGCGCAGCCACCcg                                                                                                  >  1:2869560/1‑99 (MQ=255)   CATCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAAGGGGGCGCAGCCACCcg                                                                                                  <  1:977542/101‑3 (MQ=255)   CATCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAAGGGGGCGCAGCCACCcg                                                                                                  >  2:480499/1‑99 (MQ=255)                                                                                                 caGCCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCTTGATGATCGCGCAGGCCTCGTCGCCGACCTTC    <  2:2346513/99‑1 (MQ=255)                                                                                                  aGCCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCTTGATGATCGCGCAGGCCTCGTCGCCGACCTTCA   >  1:1315927/2‑101 (MQ=255)                                                                                                   GCCACCCGGCCGCTCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCTTGATGATCGCGCAGGCCTCGTCGCCGACCTTCAG  <  2:3735680/101‑1 (MQ=255)                                                                                                   GCCACCCGGCCGCGCCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCTTGATGATCGCGCAGGCCTCGTCGCCGACCTTCAG  <  2:3818552/101‑1 (MQ=255)                                                                                                                                                                                                         TTCATCGCAAGGCCCCCTTTTCGCACCCGCAGCTTAGCAGGATGCACGGGCGCGGCCAGACGCAGTTTGGCGCAGGGCCAAAGGAAGGGGG.GCAGCCG....................................................................................................  >  NC_014034/3461286‑3461383 ...................................................................................................CCACCGGGCCGC.CCCCCAACCCCGGTCGTTCGATCAGTTCTTGCCGACGATGACGTCAGAGGCCTTGATGATCGCGCAGGCCTCGTCGCCGACCTTCAG  >  NC_014034/3461387‑3461485 Base quality scores:  ATCG  < 3 ≤  ATCG  < 21 ≤  ATCG  < 29 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG