New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 3462304 =175 (0.930)4 (0.030) 4/178 22.4 0.02 coding (316/834 nt) RCAP_rcc03262 hypothetical protein
?NC_014035 = 113955 153 (1.080)coding (161/1209 nt) oadB Na+‑transporting methylmalonyl‑CoA/oxaloacetate decarboxylase subunit beta
Rejected: Position hash score below cutoff.

CCGGAAGTTCCGCGCGACCTTGGACGCGTTGGTGCGCAAGGCTTTCGTCGGCCGCCCCGACCGGCCCAATCCGGTGCATGACTGGCTGGCCTCGATGCGGGTGCCGATGG....................................................................................................  <  NC_014034/3462413‑3462304
...................................................................................................GGTGCCGATGGGCCTTGGCATGATGGCGGTCAACGCCGGCGTGATGATCCTGGAAGGCGGCCAGGTCGGCACGCTGGTGATCTCGCCCCTGGTATCCGAGACGAATGCGCT  <  NC_014035/113955‑113856
                                                                                                                                                                                                                  
           GCGCGACCTTGGACGCGTTGGTGCGCAAGGCTTTCGTCGGCCGCCCCGACCGGCCCAATCCGGTGCATGACTGGCTGGCCTCGATGCGGGGGCCGATGGGC                                                                                                    >  2:1128141/1‑101 (MQ=255)
                    TGGGCGCGTTGGTGCGCAAGGCTTTCGTCGGCCGCCCCGACCGGCCCAATCCGGTGCATGACTGGCTGGCCTCGATGCGGGTGCCGATGGGCGTTGGCAcc                                                                                           >  2:3585470/1‑99 (MQ=255)
                                              GTCGGCCGCCCCGACCGGCCCAATCCGGTGCATGACTGGCTGGCCTCGATGCGGGTGCCGATGGGCCTTGGCATGATGGCGGTCAACGCCGGCGTGATGAT                                                                 >  1:2330488/1‑101 (MQ=255)
                                                    CGCCCCGACCGGCCCAATCCGGTGCATGACTGGCTGGCCTCGATGCGGGTGCCGATGGGCCTTGGCATGATGGCGGTCAACGCCGGCGTGATGATCCTGGA                                                           <  2:2330320/101‑1 (MQ=255)
                                                                                                                                                                                                                  
CCGGAAGTTCCGCGCGACCTTGGACGCGTTGGTGCGCAAGGCTTTCGTCGGCCGCCCCGACCGGCCCAATCCGGTGCATGACTGGCTGGCCTCGATGCGGGTGCCGATGG....................................................................................................  <  NC_014034/3462413‑3462304
...................................................................................................GGTGCCGATGGGCCTTGGCATGATGGCGGTCAACGCCGGCGTGATGATCCTGGAAGGCGGCCAGGTCGGCACGCTGGTGATCTCGCCCCTGGTATCCGAGACGAATGCGCT  <  NC_014035/113955‑113856

Base quality scores:  ATCG  < 3 ≤  ATCG  < 19 ≤  ATCG  < 27 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG