New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 3568550186 (0.950)2 (0.010) 2/184 31.5 0.01 coding (1081/2568 nt) RCAP_rcc03372 hypothetical protein
?NC_014034 = 3568764 212 (1.000)coding (1295/2568 nt) RCAP_rcc03372 hypothetical protein
Rejected: Position hash score below cutoff.

CGCGCACGCTTTTCCGCAAATACACCGATCTTTACCGCGACATCGACACGGCCGAGGCGGCATTCCTTGATTTCGAACGCTGGTGGGGGGGCTTCTTCCTGCTGGCCG....................................................................................................  >  NC_014034/3568443‑3568550
....................................................................................................GCTGGCCGCGGATGCGGATTTCGGCGACATCGGCATAGGTCGCGACGATCCAGTTCAGCGCCTGTTGCGGCGGCGTGATGCTGTCGCCGTGGCTGGCAAAGACGATGA  <  NC_014034/3568764‑3568665
                                                                                                                                                                                                                
                                TACCGCGACATCGACACGGCCGAGGCGGCATTCCTTGATTTCGAACGCTGGTGGGGGGGCTTCTTCCTGCTGGCCGCGGATGCGGATTTCGGCGACATCGG                                                                             >  1:2889406/1‑101 (MQ=255)
                                                                         CGAACGCTGGGGGGGTGGCTTCTTCCTGCTGGCCGCGGATGCGGATTTCGGCGACATCGGCATAGGTCGCGACGATCCAGTTCAGCGCCTGTTGCGGCGGC                                    <  2:2889187/101‑1 (MQ=255)
                                                                                                                                                                                                                
CGCGCACGCTTTTCCGCAAATACACCGATCTTTACCGCGACATCGACACGGCCGAGGCGGCATTCCTTGATTTCGAACGCTGGTGGGGGGGCTTCTTCCTGCTGGCCG....................................................................................................  >  NC_014034/3568443‑3568550
....................................................................................................GCTGGCCGCGGATGCGGATTTCGGCGACATCGGCATAGGTCGCGACGATCCAGTTCAGCGCCTGTTGCGGCGGCGTGATGCTGTCGCCGTGGCTGGCAAAGACGATGA  <  NC_014034/3568764‑3568665

Base quality scores:  ATCG  < 3 ≤  ATCG  < 7 ≤  ATCG  < 18 ≤  ATCG  < 29 ≤  ATCG  < 39 ≤  ATCG