New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 381896213 (1.060)2 (0.010) 2/190 32.0 0.01 coding (71/1239 nt) pepT peptidase T
?NC_014034 1770808 = 189 (0.890)coding (1140/1152 nt) lpxB lipid‑A‑disaccharide synthase
Rejected: Position hash score below cutoff.

GTCGGTCACCGTCACCTCGGCGGCGCCGATCCGGGTCAGCTCCTCGGCCAGCATCCGGGCCAGGTTCAGCTGAATCGCGGTCGAAGGCGAGGACGGGCTTTCCT....................................................................................................  >  NC_014034/381793‑381896
...................................................................................................TTCCTTCAAAGGGGCTGAAGCACGACCCCTTCGGCCTGCAATTTGCTGCGCAGCAATTTCGCCATTTCAAGGGCTTGCGGGGTGTCGCCATGCAGGCAGACGGTG  >  NC_014034/1770808‑1770907
                                                                                                                                                                                                            
                                       CTCCTCGGCCAGCATCCGGGCCAGGTTCAGCTGAATCGCGGTCGAAGGCGAGGACGGGCTTTCCTTCAAAGGGGCTGAAGCACGACCCCTTCGGCCTGCAA                                                                  >  2:1146227/1‑101 (MQ=255)
                                                    ATCCGGGCCAGGTTCAGCTGAATCGCGGTCGAAGGCGAGGACGGGCTTTCCTTCAAAGGGGCTGAAGCACGACCCCTTCGGCCTGCAATTTGCTGCGCAGC                                                     <  1:1146321/101‑1 (MQ=255)
                                                                                                                                                                                                            
GTCGGTCACCGTCACCTCGGCGGCGCCGATCCGGGTCAGCTCCTCGGCCAGCATCCGGGCCAGGTTCAGCTGAATCGCGGTCGAAGGCGAGGACGGGCTTTCCT....................................................................................................  >  NC_014034/381793‑381896
...................................................................................................TTCCTTCAAAGGGGCTGAAGCACGACCCCTTCGGCCTGCAATTTGCTGCGCAGCAATTTCGCCATTTCAAGGGCTTGCGGGGTGTCGCCATGCAGGCAGACGGTG  >  NC_014034/1770808‑1770907

Base quality scores:  ATCG  < 3 ≤  ATCG  < 31 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG