New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 405177 =204 (1.080)2 (0.010) 2/178 30.9 0.01 coding (1038/1326 nt) RCAP_rcc00376 divalent ion symporter
?NC_014034 = 3167174 191 (0.900)coding (1166/2322 nt) clpA ATP‑dependent Clp protease ATP‑binding subunit ClpA
Rejected: Position hash score below cutoff.

GAGCCGCCGACGCCGCAGGTCAGCGTGATCAGAAGCCATTGCCCGTGGCTCATGTCGGGCTCCATCGTCAACACCGCAAACATCAGCGGGATGTTGTCGACCACCGCCGAC....................................................................................................  <  NC_014034/405287‑405177
....................................................................................................CCACCGCCGACTTGATCGCGTCGTTGGTGTAGCGCACGTCGTGATGTTCCTCGAAATAGGGTTTCAGCCCCATCAGGATCTTGATGCTGTCGCCGACCGAGGGCTCGTTCA  <  NC_014034/3167174‑3167075
                                                                                                                                                                                                                   
                                                 TCATGTCGGGCTCCATCGTCAACACCGCAAACATCAGCGGGATGTTGTCGACCACCGCCGACTTGATCGCGTCGTTGGTGTAGCGCACGTCGTGATGTTCC                                                               >  1:3141811/1‑101 (MQ=255)
                                                    TGTCGGGCTCCATCGTCAACACCGCAAACATCAGCGGGATGTTGTCGACCACCGCCGACTTGATCGCGTCGTTGGTGTAGCGCACGTCGTGATGTTCCTCG                                                            <  2:3141580/101‑1 (MQ=255)
                                                                                                                                                                                                                   
GAGCCGCCGACGCCGCAGGTCAGCGTGATCAGAAGCCATTGCCCGTGGCTCATGTCGGGCTCCATCGTCAACACCGCAAACATCAGCGGGATGTTGTCGACCACCGCCGAC....................................................................................................  <  NC_014034/405287‑405177
....................................................................................................CCACCGCCGACTTGATCGCGTCGTTGGTGTAGCGCACGTCGTGATGTTCCTCGAAATAGGGTTTCAGCCCCATCAGGATCTTGATGCTGTCGCCGACCGAGGGCTCGTTCA  <  NC_014034/3167174‑3167075

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 26 ≤  ATCG  < 31 ≤  ATCG  < 38 ≤  ATCG