New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 408498 =16 (0.100)72 (0.470) 19/144 14.9 0.47 intergenic (+116/+32) glnA1/dapA glutamine synthetase/dihydrodipicolinate synthase
?NC_014034 = 1224268 144 (0.680)intergenic (‑140/+29) hisF/hisA imidazole glycerol phosphate synthase subunit HisF/1‑(5‑phosphoribosyl)‑5‑[(5‑ phosphoribosylamino)methylideneamino] imidazole‑4‑carboxamide isomerase
Rejected: Position hash score below cutoff.

Only 100 of 106 total aligned reads displayed.

TGACCGAACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGC..................................................................  <  NC_014034/408597‑408498
................................................................................................................................CTCCCCCCGGGATATTTGTGGCAAGATGAAGAGGCTTC  <  NC_014034/1224268‑1224231
                                                                                                    ||||||||||||||||||||||||||||                                      
TGACCGAACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCT                                                                   >  2:1369864/1‑101 (MQ=1)
TGACCGAACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCT                                                                   >  2:2390772/1‑101 (MQ=1)
  ACCGAACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCT                                                                 <  2:2109115/101‑1 (MQ=1)
  ACCGAACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCT                                                                 <  1:3683661/101‑1 (MQ=1)
  ACCGAACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCT                                                                 <  1:3423797/101‑1 (MQ=1)
   CCGAACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTG                                                                >  1:2602725/1‑101 (MQ=1)
   CCGAACTGACCGACGGGACCAAGGCCGCGCATGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTG                                                                <  1:4200210/101‑1 (MQ=1)
    CGAACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGC                                                               >  2:1340966/1‑101 (MQ=1)
    CGAACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGC                                                               <  2:59690/101‑1 (MQ=1)
     GAACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCC                                                              >  2:1133486/1‑101 (MQ=1)
      AACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCC                                                             >  2:380825/1‑101 (MQ=1)
      AACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCC                                                             <  2:1829331/101‑1 (MQ=1)
        CTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCC                                                           <  1:336040/101‑1 (MQ=1)
         TGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCC                                                          >  2:3415013/1‑101 (MQ=1)
          ggCCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCG                                                         <  1:1703568/99‑1 (MQ=1)
          GACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCG                                                         >  2:3080851/1‑101 (MQ=1)
           cCCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGT                                                        <  1:3446650/100‑1 (MQ=1)
            CCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTC                                                       <  1:2047605/101‑1 (MQ=1)
            CCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTC                                                       <  2:3635104/101‑1 (MQ=1)
             CGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCT                                                      <  2:1165291/101‑1 (MQ=1)
             CGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCT                                                      <  2:2867861/101‑1 (MQ=1)
              GACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTT                                                     <  1:1341066/101‑1 (MQ=1)
               ACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTG                                                    <  1:3888351/101‑1 (MQ=1)
               ACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTG                                                    <  1:3257820/101‑1 (MQ=1)
                 GGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCT                                                  >  2:2273937/1‑101 (MQ=1)
                    ACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTC                                               >  2:3435004/1‑101 (MQ=1)
                     CCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCA                                              >  2:1099889/1‑101 (MQ=1)
                       AAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGC                                            <  2:3988575/101‑1 (MQ=1)
                       AAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGC                                            >  2:1823263/1‑101 (MQ=1)
                       AAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGC                                            >  1:3364670/1‑101 (MQ=1)
                       AAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGC                                            >  2:1114020/1‑101 (MQ=1)
                             GCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCT                                      <  1:1369964/101‑1 (MQ=1)
                             GCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCT                                      <  1:893713/101‑1 (MQ=1)
                              CGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTC                                     <  1:3154481/101‑1 (MQ=1)
                              CGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTC                                     <  2:383005/101‑1 (MQ=1)
                              CGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTC                                     <  2:2020580/101‑1 (MQ=1)
                               GCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCC                                    <  1:380876/101‑1 (MQ=1)
                               GCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCC                                    <  1:969324/101‑1 (MQ=1)
                                CTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCC                                   <  2:56671/101‑1 (MQ=1)
                                CTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCC                                   >  2:3087060/1‑101 (MQ=1)
                                CTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCC                                   <  2:3722250/101‑1 (MQ=1)
                                 TTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCC                                  >  1:4154255/1‑101 (MQ=1)
                                  TGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCC                                 <  2:193211/101‑1 (MQ=1)
                                  TGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCC                                 <  2:2983468/101‑1 (MQ=1)
                                  TGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCC                                 <  1:4191369/101‑1 (MQ=1)
                                  TGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCC                                 <  2:256970/101‑1 (MQ=1)
                                  TGACCCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCC                                 <  2:174247/101‑1 (MQ=1)
                                   tACGCCGCGATGCAACACGCCGGGCTGATCTGAGTTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCC                                <  2:3023796/100‑1 (MQ=1)
                                   GACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCC                                >  1:3803522/1‑101 (MQ=1)
                                   GACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCC                                <  1:4003930/101‑1 (MQ=1)
                                     CGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCcg                              >  1:86651/1‑99 (MQ=1)
                                     CGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGG                              >  2:1799479/1‑101 (MQ=1)
                                       CCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGA                            >  1:472022/1‑101 (MQ=1)
                                       CCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGA                            <  2:3867694/101‑1 (MQ=1)
                                        CGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGAT                           <  1:1271519/101‑1 (MQ=1)
                                         GCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATA                          <  2:2700006/101‑1 (MQ=1)
                                          CGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATAT                         <  2:1627531/101‑1 (MQ=1)
                                          CGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATAT                         <  1:2033839/101‑1 (MQ=1)
                                          CGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATAT                         <  2:3954020/101‑1 (MQ=1)
                                           GATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATT                        <  1:701751/101‑1 (MQ=1)
                                           GATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATT                        <  2:1930649/101‑1 (MQ=1)
                                             TGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTG                      <  2:4108290/101‑1 (MQ=1)
                                              GCAACGCGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGc                     <  2:563473/101‑2 (MQ=11)
                                              GCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGc                     <  2:3577842/101‑2 (MQ=11)
                                                AACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGG                   >  2:1634806/1‑101 (MQ=32)
                                                AACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGG                   >  1:3276284/1‑101 (MQ=32)
                                                AACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGAAATTTGCGG                   >  1:2231206/1‑101 (MQ=17)
                                                 ACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGC                  >  1:223354/1‑101 (MQ=32)
                                                    CGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAG               >  1:228935/1‑101 (MQ=32)
                                                     GCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGA              >  2:1365626/1‑101 (MQ=32)
                                                     GCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGA              <  1:3785937/101‑1 (MQ=32)
                                                      cgGGGTTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGAT             <  1:782389/99‑1 (MQ=17)
                                                      CCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGAT             <  2:239789/101‑1 (MQ=32)
                                                      CCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGAGATATTTGCCGCAAGAT             >  2:2608844/1‑101 (MQ=12)
                                                       CGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATG            <  2:3335189/101‑1 (MQ=14)
                                                       CGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATG            <  2:2769081/101‑1 (MQ=14)
                                                       CGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATG            <  2:19976/101‑1 (MQ=14)
                                                       CGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATG            <  2:1424036/101‑1 (MQ=14)
                                                         GGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAA          <  2:1434319/101‑1 (MQ=1)
                                                          GCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAG         <  1:3803174/101‑1 (MQ=1)
                                                           CTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGg        <  1:1998602/101‑2 (MQ=11)
                                                           CTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGg        <  1:622243/101‑2 (MQ=11)
                                                           CTGATCTGAGGTAGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGg        <  2:3778110/101‑2 (MQ=0)
                                                            TGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGga       >  1:1169721/1‑99 (MQ=1)
                                                              ATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGggcc     >  2:2485896/1‑97 (MQ=11)
                                                              ATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGgaca     <  1:1249390/101‑5 (MQ=11)
                                                              ATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGgaca     >  1:976197/1‑97 (MQ=11)
                                                              ATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGgaca     <  2:2868143/101‑5 (MQ=11)
                                                               TCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGgacat    <  2:2332950/101‑6 (MQ=14)
                                                               TCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGgacat    >  1:2457365/1‑96 (MQ=14)
                                                               TCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGgacat    <  2:409701/101‑6 (MQ=14)
                                                                CTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGgacatc   <  1:1212333/101‑7 (MQ=17)
                                                                CTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGgacatc   >  2:3830015/1‑95 (MQ=17)
                                                                CTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGgacatc   >  2:158196/1‑95 (MQ=17)
                                                                CTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGgacatc   >  2:2747460/1‑95 (MQ=17)
                                                                 TGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGgacatcg  >  2:608228/1‑94 (MQ=18)
                                                                 TGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGgacatcg  >  2:3417897/1‑94 (MQ=18)
                                                                 TGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGgacatcg  <  2:2480062/101‑8 (MQ=18)
                                                                 TGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGgacatcg  <  1:2055735/101‑8 (MQ=18)
                                                                 TGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGgacatcg  <  1:107444/101‑8 (MQ=18)
                                                                                                    ||||||||||||||||||||||||||||                                      
TGACCGAACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGC..................................................................  <  NC_014034/408597‑408498
................................................................................................................................CTCCCCCCGGGATATTTGTGGCAAGATGAAGAGGCTTC  <  NC_014034/1224268‑1224231

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 39 ≤  ATCG