New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 414499 =175 (0.950)2 (0.010) 2/174 30.6 0.01 coding (1138/1371 nt) gshA glutamate‑‑cysteine ligase
?NC_014034 2885628 = 190 (0.900)coding (586/1101 nt) RCAP_rcc02693 permease YjgP/YjgQ family protein
Rejected: Position hash score below cutoff.

GTATGACCAGTCGGCGCTTGATGCCGCATGGGATCTGGTGAAGCATTGGGACGCCGAGACCCGCGACGGGCTGCGCGTCGCCGCCGCCAAACACGCCCTGCAGGCCGAGGCGG....................................................................................................  <  NC_014034/414611‑414499
....................................................................................................CAGGCCGAGGCGGCATCGATCCGGCGCACCGGCCCGGCCTTGGCGTCGAACAGAAGGAAGGTCACCTGGTAAAGCGCCGTCGCATCGGCATTGCCGCGCATCGCATGGATCAC  >  NC_014034/2885628‑2885727
                                                                                                                                                                                                                     
                                             TTGGGACGCCGAGACCCGCGACGGGCTGCGCGTCGCCGCCGCCAAACACGCCCTGCAGGCCGAGGCGGCATCGATCCGGCGCACCGGCCCGGCCTTGGCGT                                                                     >  1:3384569/1‑101 (MQ=255)
                                                             CGCGACGGGCTGCGCGTCCCCGCCGCCAAACACGCCCTGCAGGCCGAGGCGGCATCGATCCGGCGCACCGGCCCGGCCTTGGCGTCGAACAGAAGGAAGGT                                                     <  2:3384324/101‑1 (MQ=255)
                                                                                                                                                                                                                     
GTATGACCAGTCGGCGCTTGATGCCGCATGGGATCTGGTGAAGCATTGGGACGCCGAGACCCGCGACGGGCTGCGCGTCGCCGCCGCCAAACACGCCCTGCAGGCCGAGGCGG....................................................................................................  <  NC_014034/414611‑414499
....................................................................................................CAGGCCGAGGCGGCATCGATCCGGCGCACCGGCCCGGCCTTGGCGTCGAACAGAAGGAAGGTCACCTGGTAAAGCGCCGTCGCATCGGCATTGCCGCGCATCGCATGGATCAC  >  NC_014034/2885628‑2885727

Base quality scores:  ATCG  < 3 ≤  ATCG  < 26 ≤  ATCG  < 30 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG