New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 617156	173 (0.850)	2 (0.010)	2/192	32.2	0.01	coding (1435/2244 nt)	cbbO	rubisco activation protein CbbO
	?	NC_014034	= 3724716	196 (0.930)					coding (92/297 nt)	fliE	flagellar hook‑basal body complex protein FliE
Rejected: Position hash score below cutoff.

CGCTGCACGCCCTGCGGCTGCAGCGCCTCCAGCACCCGGCGCATCCGCGCCAGAACCGGGCGGTGCGCCTGCAAGATCGCCTCGGTCAGGTCCGGATCACCGGG...................................................................................................  >  NC_014034/617053‑617156 ....................................................................................................CGGGACGGGGGGCTGGGCAAGATCGCCACGAGCTTCCTCGAAACGATGCAGCAAAGCGAGGATACGGCGAAAGCCGCCATGCTCGGCAATGCCGATCCGCACA  <  NC_014034/3724716‑3724618                                                                                                                                                                                                                                                              CCAGAACCGGGCGGTGCGCCTGCAAGATCGCCTCGGTCAGGTCCGGATCACCGGGACGGGGGGCTGGGCAAGATCGCCACGAGCTTCCTCGAAACGATGCA                                                       >  1:1113544/1‑101 (MQ=255)                                                                   GCCTGCAAGATCGCCTCGGTCAGGTCCGGATCACCGGGACGGGGGGCTGGGCAAGATCGCCACGAGCTTCCTCGAAACGATGCAGCAAAGCGAGGATACGG                                      <  2:1113450/101‑1 (MQ=255)                                                                                                                                                                                                             CGCTGCACGCCCTGCGGCTGCAGCGCCTCCAGCACCCGGCGCATCCGCGCCAGAACCGGGCGGTGCGCCTGCAAGATCGCCTCGGTCAGGTCCGGATCACCGGG...................................................................................................  >  NC_014034/617053‑617156 ....................................................................................................CGGGACGGGGGGCTGGGCAAGATCGCCACGAGCTTCCTCGAAACGATGCAGCAAAGCGAGGATACGGCGAAAGCCGCCATGCTCGGCAATGCCGATCCGCACA  <  NC_014034/3724716‑3724618 Base quality scores:  ATCG  < 3 ≤  ATCG  < 32 ≤  ATCG  < 34 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG