New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 691339177 (0.900)2 (0.010) 2/186 31.7 0.01 coding (2524/2673 nt) RCAP_rcc00637 hypothetical protein
?NC_014034 2874712 = 203 (0.960)coding (969/1023 nt) RCAP_rcc02684 polyphosphate kinase 2 domain‑containing protein
Rejected: Position hash score below cutoff.

AGACGCAGGTTCTGTTCGATGTCGATGTCGCCGCCCAGCCCGTCGCGCGCATTCGCATCCATCACCGCATCCAGCGCGAAAGCCCAGTCCTCCCACATGTCGCTGGC...................................................................................................  >  NC_014034/691233‑691339
....................................................................................................CGCTGGCCAGAATATGCGCCGCGCCATGCACGACATGGCTGGCATGGCCGACGATCAGCGGATCGGGGGGCGTGACGATCGCCGGATCCTTGTCGGGATAGTCGAG  >  NC_014034/2874712‑2874810
                                                                                                                                                                                                              
                                                       CATCCATCACCGCATCCAGCGCGAAAGCCCAGTCCTCCCACATGTCGCTGGCCAGAATATGCGCCGCGCCATGCACGACATGGCTGGCATGGCCGGCGATC                                                    >  2:348046/1‑101 (MQ=255)
                                                                           GCGAAAGCCCAGTCCTCCCACATGTCGCTGGCCAGAATATGCGCCGCGCCATGCACGACATGGCTGGCATGGCCGACGATCAGCGGATCGGGGGGCGTGAC                                <  1:348097/101‑1 (MQ=255)
                                                                                                                                                                                                              
AGACGCAGGTTCTGTTCGATGTCGATGTCGCCGCCCAGCCCGTCGCGCGCATTCGCATCCATCACCGCATCCAGCGCGAAAGCCCAGTCCTCCCACATGTCGCTGGC...................................................................................................  >  NC_014034/691233‑691339
....................................................................................................CGCTGGCCAGAATATGCGCCGCGCCATGCACGACATGGCTGGCATGGCCGACGATCAGCGGATCGGGGGGCGTGACGATCGCCGGATCCTTGTCGGGATAGTCGAG  >  NC_014034/2874712‑2874810

Base quality scores:  ATCG  < 3 ≤  ATCG  < 24 ≤  ATCG  < 31 ≤  ATCG  < 34 ≤  ATCG  < 40 ≤  ATCG