New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 740089 =155 (0.810)2 (0.010) 2/180 31.1 0.01 coding (69/642 nt) bchJ bacteriochlorophyll 4‑vinyl reductase
?NC_014034 3361566 = 185 (0.870)coding (200/1008 nt) RCAP_rcc03163 hypothetical protein
Rejected: Position hash score below cutoff.

ACTGGCTTTCCGGCAGCATCCCCGAGTCAGGCGGCGGGACGGGCACGCCCGCCAGCCGCATCACCCGGTCACGCTCGGCACGGCCAAGGTGGCGGTCGAGCACGCCGATC....................................................................................................  <  NC_014034/740198‑740089
....................................................................................................CACGCCGATCACCAGCGTCTTGCAGCCCGCGGCCTTGGCGGTGGCCAGGTTCATCTCGGGCAGGCCCAGATCGGCCTTGCAGCCCTCCATCCGGTATTGGCCGACGGCAT  >  NC_014034/3361566‑3361665
                                                                                                                                                                                                                  
                                                                      ACGCTCGGCACGGCCAAGGTGGCGGTCGAGCACGCCGATCACCAGCGTCTTGCAGCCCGCGGCCTTGGCGGTGGCCAGGTTCATCTCGGGCAGGCCCAGAT                                         >  2:490724/1‑101 (MQ=255)
                                                                             GCACGGCCAAGGTGGCGGTCGAGCACGCCGATCACCAGCGTCTTGCAGCCCGCGGCCTTGGCGGTGGCCAGGTTCATCTCGGGCAGGCCCAGATCGGCCTT                                  <  1:490781/101‑1 (MQ=255)
                                                                                                                                                                                                                  
ACTGGCTTTCCGGCAGCATCCCCGAGTCAGGCGGCGGGACGGGCACGCCCGCCAGCCGCATCACCCGGTCACGCTCGGCACGGCCAAGGTGGCGGTCGAGCACGCCGATC....................................................................................................  <  NC_014034/740198‑740089
....................................................................................................CACGCCGATCACCAGCGTCTTGCAGCCCGCGGCCTTGGCGGTGGCCAGGTTCATCTCGGGCAGGCCCAGATCGGCCTTGCAGCCCTCCATCCGGTATTGGCCGACGGCAT  >  NC_014034/3361566‑3361665

Base quality scores:  ATCG  < 3 ≤  ATCG  < 26 ≤  ATCG  < 30 ≤  ATCG  < 34 ≤  ATCG  < 40 ≤  ATCG