New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 74479323 (0.110)14 (0.070) 3/196 31.3 0.27 intergenic (+178/+34) idi2/bchO isopentenyl‑diphosphate delta‑isomerase/magnesium‑chelatase BchO
?NC_014034 900805 = 51 (0.240)intergenic (‑134/‑153) ldh/ftsW L‑lactate dehydrogenase/cell division protein FtsW
Rejected: Position hash score below cutoff.

CAAGATGAAATGAATGACTTTCCGTCTGCGGCGGTACAGCCTGTCCCACCCCTGCTTTTCCTTGGCAAAATACGCCGGGGGGTGCGGGGGGCGGAGCCCCCC....................................................................................................  >  NC_014034/744692‑744793
....................................................................................................CCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAGAGTCGGCGCCAA  >  NC_014034/900805‑900904
                                                                                                                                                                                                          
                                                                                   tgcGGGGGCGGAG..CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGG                  >  2:714751/4‑101 (MQ=32)
                                                                                     cGGGGGCGGAG..CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCT                >  2:1828391/2‑101 (MQ=11)
                                                                                      gggggggcgaCCCCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGC                 <  2:35998/91‑1 (MQ=0)
                                                                                      GGGGGCGGAG..CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTA               >  1:168831/1‑101 (MQ=1)
                                                                                      GGGGGCGGAG..CCCCCGCGGGTCGCCCCGGCCATGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTA               >  1:3793557/1‑101 (MQ=1)
                                                                                       GGGGCGGAG..CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAG              >  1:3794147/1‑101 (MQ=1)
                                                                                       GGGGCGGAG..CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAG              >  2:575608/1‑101 (MQ=1)
                                                                                        GGGGGGGGCCCCCCGGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTA               <  1:2191379/101‑1 (MQ=255)
                                                                                           ggcggagCCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAGAG            >  1:2411725/8‑101 (MQ=1)
                                                                                            gcgccgCCCCGGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAGAGT           <  2:4099821/95‑1 (MQ=0)
                                                                                              ggagCCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAGAGTCG         >  1:1672105/5‑101 (MQ=1)
                                                                                              ggaCCCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAGAGTCG         <  1:4109606/98‑1 (MQ=1)
                                                                                                agCCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAGAGTCGGC       >  1:3550256/3‑101 (MQ=1)
                                                                                                   CCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAGAGTCGGCGCC    >  2:2439823/1‑101 (MQ=1)
                                                                                                                                                                                                          
CAAGATGAAATGAATGACTTTCCGTCTGCGGCGGTACAGCCTGTCCCACCCCTGCTTTTCCTTGGCAAAATACGCCGGGGGGTGCGGGGGGCGGAGCCCCCC....................................................................................................  >  NC_014034/744692‑744793
....................................................................................................CCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAGAGTCGGCGCCAA  >  NC_014034/900805‑900904

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG