New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 785028 =198 (1.020)2 (0.010) 2/184 31.5 0.01 coding (127/1575 nt) pntA pyridine nucleotide transhydrogenase subunit alpha
?NC_014034 2712044 = 215 (1.010)coding (285/864 nt) RCAP_rcc02523 pyrimidine ABC transporter permease
Rejected: Position hash score below cutoff.

AACCGGCGGGCGCACCTTGGCCACCACGTCGACCGCGTCGAAAAGCGCCGCTGCGCCCTCGACCACGGTCACGCCGACGGCCGCATAAGCGCTGTCCTCGAAGCCCGC....................................................................................................  <  NC_014034/785135‑785028
....................................................................................................AAGCCCGCCATCGTCGCGGAAAAGGTGATCCAGGAATGCAGTACCAGGCTTTTCTTCGAGGTGATCTTCTGCCCCGTGAACCCGTCCCACAGCCCCTTCGCCACCTGA  >  NC_014034/2712044‑2712143
                                                                                                                                                                                                                
                                        AAAAGCGCCGCTGCGCCCTCGACCACGGTCACGCCGACGGCCGCATAAGCGCTGTCCTCGAAGCCCGCCATCGTCGCGGAAAAGGTGATCCAGGAATGCAG                                                                     >  2:707056/1‑101 (MQ=255)
                                                                ACGGTCACGCCGACGGCCGCATAAGCGCTGTCCTCGAAGCCCGCCATCGTCGCGGAAAAGGTGATCCAGGAATGCAGTACCAGGCTTTTCTTCGAGGTGAT                                             <  1:707133/101‑1 (MQ=255)
                                                                                                                                                                                                                
AACCGGCGGGCGCACCTTGGCCACCACGTCGACCGCGTCGAAAAGCGCCGCTGCGCCCTCGACCACGGTCACGCCGACGGCCGCATAAGCGCTGTCCTCGAAGCCCGC....................................................................................................  <  NC_014034/785135‑785028
....................................................................................................AAGCCCGCCATCGTCGCGGAAAAGGTGATCCAGGAATGCAGTACCAGGCTTTTCTTCGAGGTGATCTTCTGCCCCGTGAACCCGTCCCACAGCCCCTTCGCCACCTGA  >  NC_014034/2712044‑2712143

Base quality scores:  ATCG  < 3 ≤  ATCG  < 31 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG