New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 856752181 (0.920)2 (0.010) 2/186 25.2 0.01 coding (597/3066 nt) cheR1 chemotaxis protein methyltransferase CheR
?NC_014035 = 117738 132 (0.940)coding (1192/1365 nt) chrA chromate transporter
Rejected: Position hash score below cutoff.

GCGGCGTCGCCATCGCGCAGGATCCGCGCGACGCGCGCTTTGACGGCATGCCGCGTTCGGCCATCGCGACGGGCTTCATCGATTCCGCGCTGGGCATCGAGCGGATC....................................................................................................  >  NC_014034/856646‑856752
....................................................................................................GCGGATCAGCCTTGGGCCGGTCAGCCTTGATCTGCCGCAGATGGCCACGCTTGATCTGCCCGCAACCGGAATTGCCGCCGTCGCGGTCTGGGCGCTGTTCCGGCGCG  <  NC_014035/117738‑117639
                                                                                                                                                                                                               
                                      TTTGACGGCATGCCGCGTTCGGCCATCGCGACGGGCTTCATCGATTCCGCGCTGGGCATCGAGCGGATCAGCCTTGGGCCGGTCAGCCTTGATCTGCCGCA                                                                      >  1:3086268/1‑101 (MQ=255)
                                                                  CGACGGGCTTCATCGATTCCGCGCTGGGCATCGAGCGGATCAGCCTTGGGCCGGTCAGCCTTGATCTGCCGCAGATGGCCACGCTTGATCTGCCCGCAACC                                          <  2:3086038/101‑1 (MQ=255)
                                                                                                                                                                                                               
GCGGCGTCGCCATCGCGCAGGATCCGCGCGACGCGCGCTTTGACGGCATGCCGCGTTCGGCCATCGCGACGGGCTTCATCGATTCCGCGCTGGGCATCGAGCGGATC....................................................................................................  >  NC_014034/856646‑856752
....................................................................................................GCGGATCAGCCTTGGGCCGGTCAGCCTTGATCTGCCGCAGATGGCCACGCTTGATCTGCCCGCAACCGGAATTGCCGCCGTCGCGGTCTGGGCGCTGTTCCGGCGCG  <  NC_014035/117738‑117639

Base quality scores:  ATCG  < 3 ≤  ATCG  < 31 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG