New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 887093 =164 (0.830)2 (0.010) 2/186 31.7 0.01 coding (1102/1170 nt) nhaA Na+/H+ antiporter NhaA
?NC_014034 2226084 = 145 (0.680)coding (1083/1893 nt) zntA1 heavy metal translocating P‑type ATPase
Rejected: Position hash score below cutoff.

CGCGCTGGCCGGGATCGGCTTCACCATGTCGCTGTTCATCGGCTCGCTGAATTTTGAAGCCGATGCCGAAATGAACGCGGTGCGGCTGGGGGTTCTGGCAGGATCGC....................................................................................................  <  NC_014034/887199‑887093
....................................................................................................GGATCGCCGTGGCGATCGGATGTTCGGATTGCGCCTCGATCCCGGCCAGACGGGCCAGAAACAGCGCCTCGTCGCCCTCGCAGTGGATATCGACGATCTCCTGCTTG  >  NC_014034/2226084‑2226183
                                                                                                                                                                                                               
                                                                         AACGCGGTGCGGCTGGGGGTTCTGGCAGGATCGCCGTGGCGATCGGATGTTCGGATTGCGCCTCGATCCCGGCCAGACGGGCCAGAAACAGCGCCTCGTCG                                   <  1:825241/101‑1 (MQ=255)
                                                                         AACGCGGTGCGGCTGGGGGTTCTGGCAGGATCGCCGTGGCGATCGGATGTTCGGATTGCGCCTCGATCCCGGCCAGACGGGCCAGAAAACGCGCCTCGTCG                                   >  2:825160/1‑101 (MQ=255)
                                                                                                                                                                                                               
CGCGCTGGCCGGGATCGGCTTCACCATGTCGCTGTTCATCGGCTCGCTGAATTTTGAAGCCGATGCCGAAATGAACGCGGTGCGGCTGGGGGTTCTGGCAGGATCGC....................................................................................................  <  NC_014034/887199‑887093
....................................................................................................GGATCGCCGTGGCGATCGGATGTTCGGATTGCGCCTCGATCCCGGCCAGACGGGCCAGAAACAGCGCCTCGTCGCCCTCGCAGTGGATATCGACGATCTCCTGCTTG  >  NC_014034/2226084‑2226183

Base quality scores:  ATCG  < 3 ≤  ATCG  < 15 ≤  ATCG  < 23 ≤  ATCG  < 30 ≤  ATCG  < 39 ≤  ATCG