New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 894336 =202 (1.030)2 (0.010) 2/186 31.7 0.01 coding (705/2175 nt) ppk polyphosphate kinase
?NC_014034 1924578 = 190 (0.900)coding (334/816 nt) RCAP_rcc01778 hypothetical protein
Rejected: Position hash score below cutoff.

AGCAGATCGCCCGCTTCGTGCGTCTGCCCGGCGAGGCCCGCTTCCTGCCGCTCGAAGAGCTGCTTTTGCTGCATCTGGGCATGCTCTTTCCCGGCTATACCGACACC....................................................................................................  <  NC_014034/894442‑894336
....................................................................................................CGACACCCATGCGCTGACGATCATCTTCGGCACTTTGGTGATGGCGATCGCGCTTTACATGGCCTTTGGCAAGCAAAGCTGGCGGATCGCCGAGGGGATGCCGGGGC  >  NC_014034/1924578‑1924677
                                                                                                                                                                                                               
                                                                          atctGCATGCTCTTTCCCGGCTATACCGACACCCATGCGCTGACGATCATCTTCGGCACTTTGGTGATGGCGATCGCGCTTTACATGGCCTTTGGCAAGCA                                  <  1:2471851/97‑1 (MQ=255)
                                                                              GCATGCTCTTTCCCGGCTATACCGACACCCATGCGCTGACGATCATCTTCGGCACTTTGGTGATGGCGATCGCGCTTTACATGGCCTTTGGCAAGCAAgat                              >  2:2471667/1‑98 (MQ=255)
                                                                                                                                                                                                               
AGCAGATCGCCCGCTTCGTGCGTCTGCCCGGCGAGGCCCGCTTCCTGCCGCTCGAAGAGCTGCTTTTGCTGCATCTGGGCATGCTCTTTCCCGGCTATACCGACACC....................................................................................................  <  NC_014034/894442‑894336
....................................................................................................CGACACCCATGCGCTGACGATCATCTTCGGCACTTTGGTGATGGCGATCGCGCTTTACATGGCCTTTGGCAAGCAAAGCTGGCGGATCGCCGAGGGGATGCCGGGGC  >  NC_014034/1924578‑1924677

Base quality scores:  ATCG  < 3 ≤  ATCG  < 33 ≤  ATCG  < 34 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG