New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 898005 =190 (1.000)2 (0.010) 2/180 31.1 0.01 coding (294/909 nt) RCAP_rcc00814 LysR family transcriptional regulator
?NC_014034 = 3698097 206 (0.970)coding (283/381 nt) RCAP_rcc03490 endoribonuclease, L‑PSP family
Rejected: Position hash score below cutoff.

GCGGATCTGCTGGCGCGGGCGCCGGCGCTGCTGGATGATCTGGATGATCTTCTGGCCGGGGTCTCCGAGGGCTCGCGCGGGTTTTCCGGGGTGATCCGGCTGTCGGCG....................................................................................................  <  NC_014034/898112‑898005
..................................................................................................GCTGTCGGCGACCTTCGGCGAGATCCGTCCGGCGGCGACGATGATCGTGGCGGGGCTGGTGAACCCGGCGATGAAGATCGAGATCGAAGTCACGGCCTTCAAAGGATGAG  <  NC_014034/3698097‑3697998
                                                                                                                                                                                                                
                                                    TGGCCGGGGTCTCCGAGGGCTCGCGCGGGTTTTCCGGGGTGATCCGGCTGTCGGCGACCTTCGGCGAGATCCGTCCGGCGGCGACGATGATCGTGGCGGGG                                                         >  1:1425168/1‑101 (MQ=255)
                                                                       CTCGCGCGGGTTTTCCGGGGTGATCCGGCTGTCGGCGACCTTCGGCGAGATCCGTCCGGCGGCGACGATGATCGTGGCGGGGCTGGTGAACCCGGCGATGA                                      <  2:1425066/101‑1 (MQ=255)
                                                                                                                                                                                                                
GCGGATCTGCTGGCGCGGGCGCCGGCGCTGCTGGATGATCTGGATGATCTTCTGGCCGGGGTCTCCGAGGGCTCGCGCGGGTTTTCCGGGGTGATCCGGCTGTCGGCG....................................................................................................  <  NC_014034/898112‑898005
..................................................................................................GCTGTCGGCGACCTTCGGCGAGATCCGTCCGGCGGCGACGATGATCGTGGCGGGGCTGGTGAACCCGGCGATGAAGATCGAGATCGAAGTCACGGCCTTCAAAGGATGAG  <  NC_014034/3698097‑3697998

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG