New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 988355 =199 (1.020)2 (0.010) 2/184 31.5 0.01 coding (192/555 nt) RCAP_rcc00900 hypothetical protein
?NC_014034 = 1490668 207 (0.980)coding (239/1305 nt) ugd UDP‑glucose 6‑dehydrogenase
Rejected: Position hash score below cutoff.

AGGATCAGGTTCAGGAAAACAAAGGGATAGGGGTCAATGGCCGCGACCAGAATCACCGTGTTCAGCGCCACCCAGCCCAGCAGGACCAGCGCGAAAATCCCGATGAAG...................................................................................................  <  NC_014034/988462‑988355
....................................................................................................CGATGAAGACCGCCTCCGCGCCATCGACCGCCGCCGCCAGATCGCCGGTGAAGGACAGCCGCCCCGCCGCCACGTTCTTTGCCATCAGCACATCAAGGCCGGGTTCG  <  NC_014034/1490668‑1490570
                                                                                                                                                                                                               
                                  CAATGGCCGCGACCAGAATCACCGTGTTCAGCGCCACCCAGCCCAGCAGGACCAGCGCGAAAATCCCGATGAAGACCGCCTCCGCGCCATCGACCGCCGCC                                                                          >  1:301021/1‑101 (MQ=255)
                                                      ACCGTGTTCAGCGCCACCCAGCCCAGCAGGACCAGCGCGAAAATCCCGATGAAGACCGCCTCCGCGCCATCGACCGCCGCCGCCAGATCGCCGGTGAAGGA                                                      <  2:300976/101‑1 (MQ=255)
                                                                                                                                                                                                               
AGGATCAGGTTCAGGAAAACAAAGGGATAGGGGTCAATGGCCGCGACCAGAATCACCGTGTTCAGCGCCACCCAGCCCAGCAGGACCAGCGCGAAAATCCCGATGAAG...................................................................................................  <  NC_014034/988462‑988355
....................................................................................................CGATGAAGACCGCCTCCGCGCCATCGACCGCCGCCGCCAGATCGCCGGTGAAGGACAGCCGCCCCGCCGCCACGTTCTTTGCCATCAGCACATCAAGGCCGGGTTCG  <  NC_014034/1490668‑1490570

Base quality scores:  ATCG  < 3 ≤  ATCG  < 24 ≤  ATCG  < 31 ≤  ATCG  < 34 ≤  ATCG  < 40 ≤  ATCG