New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014035 25676 =130 (0.980)2 (0.020) 2/188 25.4 0.02 coding (119/768 nt) RCAP_rcp00038 hypothetical protein
?NC_014035 25834 = 122 (0.860)coding (371/414 nt) RCAP_rcp00039 hypothetical protein
Rejected: Position hash score below cutoff.

CGCAGCACCGAACGGGATGGATCCCCCTTGCCATGGCGGGGCTGATCGCCGCGGGCTATGCCGATCTGGCGCCGCTGTCTTTGCTGCACAGACCGCGCGTCCCGGG....................................................................................................  <  NC_014035/25781‑25676
....................................................................................................CCCGGGGTCCAAAGATCAAAGGCAAGCATCGGGGAAAGGGTGAAAATCGGCCAATCCGGCACGAAGCGGGGCGTGGCGCCCCCGGCGGCGATGAGGCGGCGGATGC  >  NC_014035/25834‑25933
                                                                                                                                                                                                              
                           TTGCCATGGCGGGGCTGATCGCCGCGGGCTATGCCGATCTGGCGCCGCTGTCTTTGCTGCACAGACCGCGCGTCCCGGGGTCCAAAGATCAAAGGCAAGCA                                                                                >  1:1322130/1‑101 (MQ=255)
                                                                TCTGGCGCCGCTGTCTTTGCTGCACAGACCGCGCGTCCCGGGGTCCAAAGATCAAAGGCAAGCATCGGGGAAAGGGTGAAAATCGGCCAATCCGGCACGAA                                           <  2:1322030/101‑1 (MQ=255)
                                                                                                                                                                                                              
CGCAGCACCGAACGGGATGGATCCCCCTTGCCATGGCGGGGCTGATCGCCGCGGGCTATGCCGATCTGGCGCCGCTGTCTTTGCTGCACAGACCGCGCGTCCCGGG....................................................................................................  <  NC_014035/25781‑25676
....................................................................................................CCCGGGGTCCAAAGATCAAAGGCAAGCATCGGGGAAAGGGTGAAAATCGGCCAATCCGGCACGAAGCGGGGCGTGGCGCCCCCGGCGGCGATGAGGCGGCGGATGC  >  NC_014035/25834‑25933

Base quality scores:  ATCG  < 3 ≤  ATCG  < 23 ≤  ATCG  < 31 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG