New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 1396433 =151 (1.030)99 (0.680) 10/138 19.5 0.47 coding (315/1578 nt) RCAP_rcc01307 hypothetical protein
?NC_014034 = 1397797 75 (0.350)intergenic (+101/+1797) RCAP_rcc01307/RCAP_rcc01309 hypothetical protein/IS66 family transposase
Rejected: Position hash score below cutoff.

Only 100 of 207 total aligned reads displayed.

CAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACGCGGCGGCGAGCACGTCGCTCCCCCCGCGGGGGCGTGGATC  >  NC_014034/1396333‑1396533
                                                                                                       |                                                                                                    
caggCAGTGGGGTGAGTGGGCTGACCGGACAAGCGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGctccac                                                                                                      <  2:4233725/98‑1 (MQ=38)
cAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGcaccac                                                                                                      <  1:3124553/101‑1 (MQ=255)
cAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGcaccac                                                                                                      >  1:2817610/1‑101 (MQ=255)
    cAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCAcggcg                                                                                                  >  2:3685383/1‑101 (MQ=255)
     aGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGGGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCAcggcgg                                                                                                 >  1:1846679/1‑101 (MQ=255)
         gggTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGc                                                                                             >  2:3449336/1‑101 (MQ=255)
          ggTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCt                                                                                            <  2:3514291/101‑1 (MQ=255)
          ggTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCt                                                                                            <  2:3785302/101‑1 (MQ=255)
                tGGGCTGACCAGACAAACGCTGTCTCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTcccccc                                                                                      <  1:2732068/101‑1 (MQ=255)
                tGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTcccccc                                                                                      <  2:339266/101‑1 (MQ=255)
                 gggCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCcg                                                                                     <  2:777905/101‑1 (MQ=255)
                  ggCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCcgc                                                                                    <  2:1700465/101‑1 (MQ=255)
                  ggCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCcgc                                                                                    >  2:1799311/1‑101 (MQ=255)
                  ggCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCcgc                                                                                    <  1:3384834/101‑1 (MQ=255)
                     tGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCggg                                                                                 >  2:1966293/1‑101 (MQ=255)
                      gACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCgggg                                                                                <  1:1031256/101‑1 (MQ=255)
                      gACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCgggg                                                                                >  2:1953598/1‑101 (MQ=255)
                       aCCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCggggg                                                                               >  2:81695/1‑101 (MQ=255)
                        ccAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGc                                                                              <  2:3042186/101‑1 (MQ=255)
                         cAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCg                                                                             >  2:1641052/1‑101 (MQ=255)
                           ttgggacggagTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCTTTCAATG.GG.GGCGGGC.GCCGGGC.CAACCTATGTCGCTCAACCCGCGGGGGCGTgg                                                                          >  2:2065022/11‑101 (MQ=2)
                            aCAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTgg                                                                          >  1:1311230/1‑101 (MQ=255)
                            aCAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTgg                                                                          >  2:3191958/1‑101 (MQ=255)
                             cAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGa                                                                         <  2:2560271/101‑1 (MQ=255)
                              aaaCGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGCAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGAt                                                                        >  2:1373424/1‑101 (MQ=255)
                                aCGCTGGCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCg                                                                      <  2:3480863/101‑1 (MQ=255)
                                  gCTGTCGCGCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                                                    <  2:2410517/101‑1 (MQ=255)
                                  gCTGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                                                    <  1:75935/101‑1 (MQ=255)
                                   cTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                                                   <  1:2099921/101‑1 (MQ=255)
                                   cTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                                                   <  1:3710715/101‑1 (MQ=255)
                                    tGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCTCGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc                                                                  <  1:1462866/101‑1 (MQ=255)
                                    tGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc                                                                  <  1:134649/101‑1 (MQ=255)
                                    tGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc                                                                  >  2:4010307/1‑101 (MQ=255)
                                    cgTCGCCCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCG.GGCCTATGGCTGACGG..ACC.CGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAct                                                                 <  1:1248864/100‑2 (MQ=2)
                                      tCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACgg                                                                >  2:1917078/1‑101 (MQ=255)
                                      tCGCTCCCCCCGCGGGGGCGTAGATCGAAACCCCGGGCGCCGCAG.CGAGTGC.GTCTGG.AACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAActat                                                               <  2:738745/101‑4 (MQ=2)
                                       cGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGa                                                               <  2:657589/101‑1 (MQ=255)
                                        gCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGAc                                                              >  2:250174/1‑101 (MQ=255)
                                         cTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTTCCCCCGCGGGGGCGTGCATCGAAACGGAcc                                                             >  1:1685474/1‑101 (MQ=255)
                                         cTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGAcc                                                             <  2:873510/101‑1 (MQ=255)
                                          tCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCt                                                            >  1:3252312/1‑101 (MQ=255)
                                          tCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCt                                                            >  2:3910148/1‑101 (MQ=255)
                                           ccccccGGGGGGGCGTGAATCAAACCCGCGCCCTGCG.GG.TGAT.GC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGa                                                          <  2:2864095/101‑1 (MQ=37)
                                           ccccccGCGGGGGCGTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTg                                                           <  1:3544600/101‑1 (MQ=255)
                                           ccccccGCGGGGGCGTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTg                                                           <  2:3553741/101‑1 (MQ=255)
                                            cccccGCGGGGGCGTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGa                                                          <  2:4127355/101‑1 (MQ=255)
                                            cccccGCGGGGGCGTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGa                                                          >  1:1889704/1‑101 (MQ=255)
                                             ccccGCGGGGGCGTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGaa                                                         >  1:1521778/1‑101 (MQ=255)
                                             ccccGCGGGGGCGTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGaa                                                         <  1:1015004/101‑1 (MQ=255)
                                              cccGCGGGGGCGTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGaaa                                                        >  1:2361285/1‑101 (MQ=255)
                                               ccGCGGGGGCGTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGCAAt                                                       >  1:2198041/1‑101 (MQ=255)
                                                cgcgGGGGCGTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAAtt                                                      <  1:4053288/101‑1 (MQ=255)
                                                cgcgGGGGCGTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAAtt                                                      >  1:2568008/1‑101 (MQ=255)
                                                   gggggCGTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTACCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCcg                                                   >  1:433325/1‑101 (MQ=255)
                                                    ggggCGTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCcgc                                                  <  2:2887474/101‑1 (MQ=255)
                                                    ggggCGTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCcgc                                                  >  1:1202031/1‑101 (MQ=255)
                                                    ggggCGTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCcgc                                                  <  1:1590410/101‑1 (MQ=255)
                                                       gCGTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCggg                                               >  1:1381022/1‑101 (MQ=255)
                                                       gCGTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCggg                                               >  1:4207779/1‑101 (MQ=255)
                                                        cGTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGa                                              <  1:2428197/101‑1 (MQ=255)
                                                         gTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGaa                                             <  2:2820795/101‑1 (MQ=255)
                                                         gTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGaa                                             >  1:29767/1‑101 (MQ=255)
                                                         gTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGaa                                             >  1:3788082/1‑101 (MQ=255)
                                                          tcgATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGaaa                                            <  2:3355306/99‑1 (MQ=255)
                                                           ggATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAAc                                           <  2:536488/101‑1 (MQ=255)
                                                           ggATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAAc                                           >  1:2924278/1‑101 (MQ=255)
                                                            gATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAAcg                                          <  2:4116481/101‑1 (MQ=255)
                                                              tCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAAcgcg                                        <  1:1365325/101‑1 (MQ=255)
                                                              tCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAAcgcg                                        >  1:2152672/1‑101 (MQ=255)
                                                               cGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACgcgg                                       >  1:2652948/1‑101 (MQ=255)
                                                               cGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACgcgg                                       >  2:100121/1‑101 (MQ=255)
                                                                gAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACgcggc                                      >  1:4062489/1‑101 (MQ=255)
                                                                    ccGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACgcggcggcg                                  <  2:3643817/101‑1 (MQ=255)
                                                                       cgcCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACGCGGCGGCGAGc                               <  1:3449588/101‑1 (MQ=255)
                                                                       cgcCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACGCGGCGGCGAGc                               >  2:2010912/1‑101 (MQ=255)
                                                                        ggccTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACGCGGCGGCGAGCa                              <  1:4102034/99‑1 (MQ=255)
                                                                         cccTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACGCGGCGGCGAGCAc                             >  1:1745962/1‑101 (MQ=255)
                                                                           cTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACGCGGCGGCGAGCACGt                           >  2:3103884/1‑101 (MQ=255)
                                                                            tGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACGCGGCGGCGAGCACGTc                          >  2:2573938/1‑101 (MQ=255)
                                                                             gCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACGCGGCGGCGAGCACGTCg                         <  2:1846559/101‑1 (MQ=255)
                                                                                 gg.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACGCGGCGGCGAGCACGTCGCTc                      >  1:2702747/1‑101 (MQ=255)
                                                                                  g.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACGCGGCGGCGAGCACGTCGCTcc                     >  1:3997758/1‑101 (MQ=255)
                                                                                     gATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACGCGGCGGCGAGCACGTCGCTcccc                   >  2:961341/1‑101 (MQ=255)
                                                                                      aTGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACGCGGCGGCGAGCACGTCGCTccccc                  >  1:2523448/1‑101 (MQ=255)
                                                                                       tGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACGCGGCGGCGAGCACGTCGCTcccccc                 <  1:1687492/101‑1 (MQ=255)
                                                                                         gC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACGCGGCGGCGAGCACGTCGCTCCCCCcgc               >  1:896723/1‑101 (MQ=255)
                                                                                             aCGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACGCGGCGGCGAGCACGTCGCTCCCCCCGCggg            <  1:1934901/101‑1 (MQ=255)
                                                                                              cGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACGCGGCGGCGAGCACGTCGCTCCCCCCGCgggg           <  2:1197710/101‑1 (MQ=255)
                                                                                              cGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACGCGGCGGCGAGCACGTCGCTCCCCCCGCgggg           >  1:2450056/1‑101 (MQ=255)
                                                                                               gggCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACGCGGCGGCGAGCACGTCGCTCCCCCCGCggggg          >  1:2253151/1‑101 (MQ=255)
                                                                                               gggCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACGCGGCGGCGAGCACGTCGCTCCCCCCGCggggg          >  1:2016992/1‑101 (MQ=255)
                                                                                                ggCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACGCGGCGGCGAGCACGTCGCTCCCCCCGCGGGGGc         >  1:488584/1‑101 (MQ=255)
                                                                                                 gCACCCCGGCGGTGGCTCCCCCCGCGGGGCCGGGGATCGAAACGGACCTGAAATTCCGCGGGAAACGCGGCGGCGAGCACGTCGCTCCCCCCGCGGGGGCg        <  1:1503990/101‑1 (MQ=39)
                                                                                                 gCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACGCGGCGGCGAGCACGTCGCTCCCCCCGCGGGGGCg        >  1:1546318/1‑101 (MQ=255)
                                                                                                  caccacGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACGCGGCGGCGAGCACGTCGCTCCCCCCGCGGGGGCGt       <  1:3910407/101‑1 (MQ=255)
                                                                                                   gccacGGCGGTCCCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACGCGGCGGCGAGCACGTCGCTCCCCCCGCGGGGGCGTg      <  2:1267521/100‑1 (MQ=255)
                                                                                                   accacGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACGCGGCGGCGAGCACGTCGCTCCCCCCGCGGGGGCGTg      >  2:2246160/1‑101 (MQ=255)
                                                                                                    ccacGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACGCGGCGGCGAGCACGTCGCTCCCCCCGCGGGGGCGTgg     <  2:595506/101‑1 (MQ=255)
                                                                                                    ccacGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACGCGGCGGCGAGCACGTCGCTCCCCCCGCGGGGGCGTgg     <  1:1218357/101‑1 (MQ=255)
                                                                                                     cacGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACGCGGCGGCGAGCACGTCGCTCCCCCCGCGGGGGCGTGGa    <  1:1188009/101‑1 (MQ=255)
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CAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCG.GG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACGCGGCGGCGAGCACGTCGCTCCCCCCGCGGGGGCGTGGATC  >  NC_014034/1396333‑1396533

Base quality scores:  ATCG  < 3 ≤  ATCG  < 17 ≤  ATCG  < 25 ≤  ATCG  < 33 ≤  ATCG  < 39 ≤  ATCG